27 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GPC6	Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (565 aa)
	GPC4	Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (556 aa)
	Bod1	Uncharacterized protein. (145 aa)
	IDUA	Iduronidase alpha-L-. (639 aa)
	LOC101977326	Beta-galactosidase. (612 aa)
	SDC1	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (311 aa)
	I3NC62_ICTTR	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (355 aa)
	SDC3	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (404 aa)
	HGSNAT	Heparan-alpha-glucosaminide N-acetyltransferase. (666 aa)
	I3MFB7_ICTTR	Uncharacterized protein. (254 aa)
	GLB1L	Galactosidase beta 1 like; Belongs to the glycosyl hydrolase 35 family. (649 aa)
	GPC2	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (583 aa)
	Ids	Sulfatase domain-containing protein. (551 aa)
	GLB1L3	Beta-galactosidase. (646 aa)
	GPC3	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (579 aa)
	GLB1	Beta-galactosidase. (668 aa)
	AGRN	Agrin. (1964 aa)
	BOD1L1	Biorientation of chromosomes in cell division 1 like 1. (2713 aa)
	SDC4	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (176 aa)
	GUSB	Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. (575 aa)
	SDC2	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (202 aa)
	HPSE	Heparanase. (539 aa)
	SGSH	N-sulfoglucosamine sulfohydrolase. (502 aa)
	HPSE2	Heparanase 2 (inactive). (592 aa)
	NAGLU	N-acetyl-alpha-glucosaminidase. (743 aa)
	HSPG2	Heparan sulfate proteoglycan 2. (4368 aa)
	ENSSTOP00000026275	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (277 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGRN	ENSSTOP00000026275	ENSSTOP00000029835	ENSSTOP00000026275	Agrin.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.483
AGRN	GPC2	ENSSTOP00000029835	ENSSTOP00000010379	Agrin.	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.449
AGRN	GPC3	ENSSTOP00000029835	ENSSTOP00000009043	Agrin.	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.527
AGRN	GPC4	ENSSTOP00000029835	ENSSTOP00000011985	Agrin.	Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.449
AGRN	GPC6	ENSSTOP00000029835	ENSSTOP00000014910	Agrin.	Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.512
AGRN	HPSE	ENSSTOP00000029835	ENSSTOP00000007105	Agrin.	Heparanase.	0.480
AGRN	HPSE2	ENSSTOP00000029835	ENSSTOP00000003334	Agrin.	Heparanase 2 (inactive).	0.538
AGRN	HSPG2	ENSSTOP00000029835	ENSSTOP00000002120	Agrin.	Heparan sulfate proteoglycan 2.	0.656
AGRN	I3NC62_ICTTR	ENSSTOP00000029835	ENSSTOP00000021959	Agrin.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.562
AGRN	SDC1	ENSSTOP00000029835	ENSSTOP00000023085	Agrin.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.685
AGRN	SDC2	ENSSTOP00000029835	ENSSTOP00000007199	Agrin.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.556
AGRN	SDC3	ENSSTOP00000029835	ENSSTOP00000015847	Agrin.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.570
AGRN	SDC4	ENSSTOP00000029835	ENSSTOP00000008348	Agrin.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.458
BOD1L1	GUSB	ENSSTOP00000027983	ENSSTOP00000007951	Biorientation of chromosomes in cell division 1 like 1.	Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.	0.714
BOD1L1	SGSH	ENSSTOP00000027983	ENSSTOP00000004885	Biorientation of chromosomes in cell division 1 like 1.	N-sulfoglucosamine sulfohydrolase.	0.468
Bod1	GUSB	ENSSTOP00000024996	ENSSTOP00000007951	Uncharacterized protein.	Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.	0.714
Bod1	SGSH	ENSSTOP00000024996	ENSSTOP00000004885	Uncharacterized protein.	N-sulfoglucosamine sulfohydrolase.	0.468
ENSSTOP00000026275	AGRN	ENSSTOP00000026275	ENSSTOP00000029835	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Agrin.	0.483
ENSSTOP00000026275	GPC2	ENSSTOP00000026275	ENSSTOP00000010379	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.640
ENSSTOP00000026275	GPC3	ENSSTOP00000026275	ENSSTOP00000009043	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.412