13 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (530 aa)
	NGFR	Nerve growth factor receptor. (428 aa)
	Rps27a	Ubiquitin-like domain-containing protein. (156 aa)
	MYD88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (296 aa)
	RIPK2	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (538 aa)
	LOC101966763	Ubiquitin-like domain-containing protein. (156 aa)
	IRAK1	Interleukin 1 receptor associated kinase 1. (715 aa)
	ENSSTOP00000028703	Ubiquitin-like domain-containing protein. (122 aa)
	NGF	Nerve growth factor; Belongs to the NGF-beta family. (305 aa)
	ENSSTOP00000031366	Ubiquitin-like domain-containing protein. (95 aa)
	SQSTM1	Sequestosome 1. (440 aa)
	IKBKB	Inhibitor of nuclear factor kappa B kinase subunit beta. (756 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTOP00000028703	ENSSTOP00000031366	ENSSTOP00000028703	ENSSTOP00000031366	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000028703	IKBKB	ENSSTOP00000028703	ENSSTOP00000005204	Ubiquitin-like domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.687
ENSSTOP00000028703	IRAK1	ENSSTOP00000028703	ENSSTOP00000025104	Ubiquitin-like domain-containing protein.	Interleukin 1 receptor associated kinase 1.	0.626
ENSSTOP00000028703	LOC101966763	ENSSTOP00000028703	ENSSTOP00000019666	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000028703	MYD88	ENSSTOP00000028703	ENSSTOP00000012227	Ubiquitin-like domain-containing protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.647
ENSSTOP00000028703	RIPK2	ENSSTOP00000028703	ENSSTOP00000013591	Ubiquitin-like domain-containing protein.	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains.	0.548
ENSSTOP00000028703	Rps27a	ENSSTOP00000028703	ENSSTOP00000008580	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000028703	SQSTM1	ENSSTOP00000028703	ENSSTOP00000032458	Ubiquitin-like domain-containing protein.	Sequestosome 1.	0.762
ENSSTOP00000028703	TRAF6	ENSSTOP00000028703	ENSSTOP00000006521	Ubiquitin-like domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.966
ENSSTOP00000031366	ENSSTOP00000028703	ENSSTOP00000031366	ENSSTOP00000028703	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000031366	IKBKB	ENSSTOP00000031366	ENSSTOP00000005204	Ubiquitin-like domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.640
ENSSTOP00000031366	IRAK1	ENSSTOP00000031366	ENSSTOP00000025104	Ubiquitin-like domain-containing protein.	Interleukin 1 receptor associated kinase 1.	0.622
ENSSTOP00000031366	MYD88	ENSSTOP00000031366	ENSSTOP00000012227	Ubiquitin-like domain-containing protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.659
ENSSTOP00000031366	RIPK2	ENSSTOP00000031366	ENSSTOP00000013591	Ubiquitin-like domain-containing protein.	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains.	0.522
ENSSTOP00000031366	SQSTM1	ENSSTOP00000031366	ENSSTOP00000032458	Ubiquitin-like domain-containing protein.	Sequestosome 1.	0.834
ENSSTOP00000031366	TRAF6	ENSSTOP00000031366	ENSSTOP00000006521	Ubiquitin-like domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.963
ENSSTOP00000031366	UBA52	ENSSTOP00000031366	ENSSTOP00000004191	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.985
IKBKB	ENSSTOP00000028703	ENSSTOP00000005204	ENSSTOP00000028703	Inhibitor of nuclear factor kappa B kinase subunit beta.	Ubiquitin-like domain-containing protein.	0.687
IKBKB	ENSSTOP00000031366	ENSSTOP00000005204	ENSSTOP00000031366	Inhibitor of nuclear factor kappa B kinase subunit beta.	Ubiquitin-like domain-containing protein.	0.640
IKBKB	IRAK1	ENSSTOP00000005204	ENSSTOP00000025104	Inhibitor of nuclear factor kappa B kinase subunit beta.	Interleukin 1 receptor associated kinase 1.	0.813