18 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cgn	Myosin_tail_1 domain-containing protein. (1195 aa)
	LOC101966763	Ubiquitin-like domain-containing protein. (156 aa)
	LOC101959358	Uncharacterized protein. (193 aa)
	F11R	F11 receptor. (298 aa)
	PARD6A	Par-6 family cell polarity regulator alpha. (345 aa)
	SMURF1	E3 ubiquitin-protein ligase. (753 aa)
	PARD3	Par-3 family cell polarity regulator. (1296 aa)
	TGFBR1	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (489 aa)
	PARD3B	Par-3 family cell polarity regulator beta. (1204 aa)
	TGFB1	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	TGFBR2	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (592 aa)
	ENSSTOP00000028703	Ubiquitin-like domain-containing protein. (122 aa)
	LOC101963830	Uncharacterized protein. (1013 aa)
	LOC101961455	Uncharacterized protein. (334 aa)
	ENSSTOP00000031366	Ubiquitin-like domain-containing protein. (95 aa)
	Rps27a	Ubiquitin-like domain-containing protein. (156 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
	Rhoa	Ras homolog family member A. (193 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cgn	LOC101959358	ENSSTOP00000003488	ENSSTOP00000018628	Myosin_tail_1 domain-containing protein.	Uncharacterized protein.	0.620
Cgn	LOC101961455	ENSSTOP00000003488	ENSSTOP00000030796	Myosin_tail_1 domain-containing protein.	Uncharacterized protein.	0.843
Cgn	LOC101963830	ENSSTOP00000003488	ENSSTOP00000008747	Myosin_tail_1 domain-containing protein.	Uncharacterized protein.	0.843
Cgn	PARD3	ENSSTOP00000003488	ENSSTOP00000013722	Myosin_tail_1 domain-containing protein.	Par-3 family cell polarity regulator.	0.516
Cgn	PARD3B	ENSSTOP00000003488	ENSSTOP00000009167	Myosin_tail_1 domain-containing protein.	Par-3 family cell polarity regulator beta.	0.434
Cgn	Rhoa	ENSSTOP00000003488	ENSSTOP00000004082	Myosin_tail_1 domain-containing protein.	Ras homolog family member A.	0.620
ENSSTOP00000028703	ENSSTOP00000031366	ENSSTOP00000028703	ENSSTOP00000031366	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000028703	LOC101959358	ENSSTOP00000028703	ENSSTOP00000018628	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.548
ENSSTOP00000028703	LOC101966763	ENSSTOP00000028703	ENSSTOP00000019666	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000028703	PARD3	ENSSTOP00000028703	ENSSTOP00000013722	Ubiquitin-like domain-containing protein.	Par-3 family cell polarity regulator.	0.642
ENSSTOP00000028703	PARD3B	ENSSTOP00000028703	ENSSTOP00000009167	Ubiquitin-like domain-containing protein.	Par-3 family cell polarity regulator beta.	0.642
ENSSTOP00000028703	Rhoa	ENSSTOP00000028703	ENSSTOP00000004082	Ubiquitin-like domain-containing protein.	Ras homolog family member A.	0.548
ENSSTOP00000028703	Rps27a	ENSSTOP00000028703	ENSSTOP00000008580	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000028703	SMURF1	ENSSTOP00000028703	ENSSTOP00000013822	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.894
ENSSTOP00000028703	TGFB1	ENSSTOP00000028703	ENSSTOP00000008874	Ubiquitin-like domain-containing protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.536
ENSSTOP00000028703	TGFBR1	ENSSTOP00000028703	ENSSTOP00000012159	Ubiquitin-like domain-containing protein.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.	0.615
ENSSTOP00000028703	TGFBR2	ENSSTOP00000028703	ENSSTOP00000024905	Ubiquitin-like domain-containing protein.	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...]	0.615
ENSSTOP00000031366	ENSSTOP00000028703	ENSSTOP00000031366	ENSSTOP00000028703	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.985
ENSSTOP00000031366	F11R	ENSSTOP00000031366	ENSSTOP00000030678	Ubiquitin-like domain-containing protein.	F11 receptor.	0.401
ENSSTOP00000031366	LOC101959358	ENSSTOP00000031366	ENSSTOP00000018628	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.599