46 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ERMARD	ER membrane associated RNA degradation. (667 aa)
	PDCL	Phosducin like. (301 aa)
	GNB1	G protein subunit beta 1. (340 aa)
	CCT6A	Chaperonin containing TCP1 subunit 6A. (531 aa)
	RGS11	Regulator of G protein signaling 11. (465 aa)
	Csnk2a1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (391 aa)
	ARFGEF1	ADP ribosylation factor guanine nucleotide exchange factor 1. (1849 aa)
	VBP1	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (196 aa)
	PFDN2	Prefoldin subunit 2. (154 aa)
	KIF13A	Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1695 aa)
	GNB4	G protein subunit beta 4. (340 aa)
	CCT5	Chaperonin containing TCP1 subunit 5. (541 aa)
	PFDN5	Prefoldin subunit 5. (154 aa)
	CSNK2A2	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily. (343 aa)
	ARFGEF2	ADP ribosylation factor guanine nucleotide exchange factor 2. (1782 aa)
	PFDN1	Prefoldin subunit 1. (122 aa)
	CCT3	T-complex protein 1 subunit gamma. (545 aa)
	CCT4	T-complex protein 1 subunit delta. (539 aa)
	Gng14	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (72 aa)
	Ly6g5b	Uncharacterized protein. (195 aa)
	CCT7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (541 aa)
	ENSSTOP00000028039	Uncharacterized protein. (529 aa)
	RGS7	Regulator of G protein signaling 7. (480 aa)
	AP3M2	AP-3 complex subunit mu-2. (418 aa)
	KIFC3	Kinesin family member C3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1009 aa)
	Tcp1	Uncharacterized protein. (556 aa)
	ENSSTOP00000024227	AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family. (407 aa)
	CCT8	Chaperonin containing TCP1 subunit 8. (548 aa)
	CCT6B	Chaperonin containing TCP1 subunit 6B. (531 aa)
	SNX19	Sorting nexin 19. (997 aa)
	PFDN6	Prefoldin subunit 6. (129 aa)
	SPHK1	Sphingosine kinase 1. (385 aa)
	CCT8L2	Chaperonin containing TCP1 subunit 8 like 2. (565 aa)
	RGS9	Regulator of G protein signaling 9. (675 aa)
	PDC	Phosducin. (244 aa)
	FKBP9	Peptidylprolyl isomerase. (574 aa)
	PFDN4	Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (134 aa)
	GNG2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (71 aa)
	GNB2	G protein subunit beta 2. (371 aa)
	GNB3	G protein subunit beta 3. (340 aa)
	CCT2	Chaperonin containing TCP1 subunit 2. (535 aa)
	GNB5	G protein subunit beta 5. (386 aa)
	RGS6	Regulator of G protein signaling 6. (490 aa)
	CSNK2B	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (248 aa)
	Ap3m1	AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family. (418 aa)
	FKBP10	Peptidylprolyl isomerase. (583 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP3M2	Ap3m1	ENSSTOP00000024944	ENSSTOP00000011547	AP-3 complex subunit mu-2.	AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.	0.938
AP3M2	ENSSTOP00000024227	ENSSTOP00000024944	ENSSTOP00000024227	AP-3 complex subunit mu-2.	AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.	0.938
ARFGEF1	ARFGEF2	ENSSTOP00000006594	ENSSTOP00000001899	ADP ribosylation factor guanine nucleotide exchange factor 1.	ADP ribosylation factor guanine nucleotide exchange factor 2.	0.947
ARFGEF2	ARFGEF1	ENSSTOP00000001899	ENSSTOP00000006594	ADP ribosylation factor guanine nucleotide exchange factor 2.	ADP ribosylation factor guanine nucleotide exchange factor 1.	0.947
ARFGEF2	ERMARD	ENSSTOP00000001899	ENSSTOP00000010131	ADP ribosylation factor guanine nucleotide exchange factor 2.	ER membrane associated RNA degradation.	0.516
Ap3m1	AP3M2	ENSSTOP00000011547	ENSSTOP00000024944	AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit mu-2.	0.938
CCT2	CCT3	ENSSTOP00000012576	ENSSTOP00000001604	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit gamma.	0.999
CCT2	CCT4	ENSSTOP00000012576	ENSSTOP00000032494	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit delta.	0.999
CCT2	CCT5	ENSSTOP00000012576	ENSSTOP00000004101	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 5.	0.999
CCT2	CCT6A	ENSSTOP00000012576	ENSSTOP00000009410	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 6A.	0.999
CCT2	CCT6B	ENSSTOP00000012576	ENSSTOP00000023500	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 6B.	0.999
CCT2	CCT7	ENSSTOP00000012576	ENSSTOP00000028208	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
CCT2	CCT8	ENSSTOP00000012576	ENSSTOP00000024099	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 8.	0.999
CCT2	CCT8L2	ENSSTOP00000012576	ENSSTOP00000019735	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1 subunit 8 like 2.	0.998
CCT2	ENSSTOP00000028039	ENSSTOP00000012576	ENSSTOP00000028039	Chaperonin containing TCP1 subunit 2.	Uncharacterized protein.	0.998
CCT2	ERMARD	ENSSTOP00000012576	ENSSTOP00000010131	Chaperonin containing TCP1 subunit 2.	ER membrane associated RNA degradation.	0.997
CCT2	GNB1	ENSSTOP00000012576	ENSSTOP00000009443	Chaperonin containing TCP1 subunit 2.	G protein subunit beta 1.	0.684
CCT2	GNB2	ENSSTOP00000012576	ENSSTOP00000015043	Chaperonin containing TCP1 subunit 2.	G protein subunit beta 2.	0.684
CCT2	GNB3	ENSSTOP00000012576	ENSSTOP00000013951	Chaperonin containing TCP1 subunit 2.	G protein subunit beta 3.	0.684
CCT2	GNB4	ENSSTOP00000012576	ENSSTOP00000004669	Chaperonin containing TCP1 subunit 2.	G protein subunit beta 4.	0.684