42 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Fundc2	Uncharacterized protein. (151 aa)
	CSNK2A2	Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily. (343 aa)
	I3MQN1_ICTTR	Uncharacterized protein. (140 aa)
	FNDC3B	Fibronectin type III domain containing 3B. (1208 aa)
	I3MNM5_ICTTR	Uncharacterized protein. (131 aa)
	CSNK2B	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (248 aa)
	FNDC3A	Fibronectin type III domain containing 3A. (1198 aa)
	ATG12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
	ULK1	Unc-51 like autophagy activating kinase 1. (1041 aa)
	Rps27a	Ubiquitin-like domain-containing protein. (156 aa)
	Tomm40	Uncharacterized protein. (361 aa)
	TOMM7	Translocase of outer mitochondrial membrane 7. (55 aa)
	Csnk2a1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (391 aa)
	MTERF3	Mitochondrial transcription termination factor 3. (417 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
	ATG5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	I3MU26_ICTTR	Uncharacterized protein. (145 aa)
	FUNDC1	FUN14 domain containing 1. (155 aa)
	LOC101976832	Uncharacterized protein. (1356 aa)
	LOC101964833	CheR domain-containing protein. (301 aa)
	Tomm20	Uncharacterized protein. (145 aa)
	PRKN	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (463 aa)
	LOC101966763	Ubiquitin-like domain-containing protein. (156 aa)
	LOC101974345	Uncharacterized protein. (361 aa)
	TOMM6	Translocase of outer mitochondrial membrane 6. (74 aa)
	ENSSTOP00000024214	Uncharacterized protein. (151 aa)
	ULK2	Unc-51 like autophagy activating kinase 2. (1058 aa)
	PINK1	PTEN induced kinase 1. (574 aa)
	LOC101964795	Uncharacterized protein. (108 aa)
	TOMM22	Translocase of outer mitochondrial membrane 22. (143 aa)
	SQSTM1	Sequestosome 1. (440 aa)
	TOMM40L	Translocase of outer mitochondrial membrane 40 like. (308 aa)
	ENSSTOP00000031366	Ubiquitin-like domain-containing protein. (95 aa)
	Tomm5	Uncharacterized protein. (51 aa)
	Ly6g5b	Uncharacterized protein. (195 aa)
	MFN2	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
	ENSSTOP00000028723	Uncharacterized protein. (167 aa)
	ENSSTOP00000028703	Ubiquitin-like domain-containing protein. (122 aa)
	VDAC1	Voltage dependent anion channel 1. (292 aa)
	TOMM70	Translocase of outer mitochondrial membrane 70. (609 aa)
	MAP1LC3A	Microtubule associated protein 1 light chain 3 alpha. (121 aa)
	MFN1	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (741 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG12	ATG5	ENSSTOP00000010542	ENSSTOP00000014775	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
ATG12	ENSSTOP00000028723	ENSSTOP00000010542	ENSSTOP00000028723	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.691
ATG12	FUNDC1	ENSSTOP00000010542	ENSSTOP00000016103	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	FUN14 domain containing 1.	0.692
ATG12	Fundc2	ENSSTOP00000010542	ENSSTOP00000006973	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.691
ATG12	I3MNM5_ICTTR	ENSSTOP00000010542	ENSSTOP00000013279	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.863
ATG12	LOC101964795	ENSSTOP00000010542	ENSSTOP00000026655	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.863
ATG12	MAP1LC3A	ENSSTOP00000010542	ENSSTOP00000005501	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule associated protein 1 light chain 3 alpha.	0.892
ATG12	MFN1	ENSSTOP00000010542	ENSSTOP00000004657	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.768
ATG12	MFN2	ENSSTOP00000010542	ENSSTOP00000029896	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.768
ATG12	PINK1	ENSSTOP00000010542	ENSSTOP00000024799	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	PTEN induced kinase 1.	0.595
ATG12	PRKN	ENSSTOP00000010542	ENSSTOP00000018787	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.566
ATG12	SQSTM1	ENSSTOP00000010542	ENSSTOP00000032458	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Sequestosome 1.	0.883
ATG12	ULK1	ENSSTOP00000010542	ENSSTOP00000010075	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Unc-51 like autophagy activating kinase 1.	0.968
ATG12	ULK2	ENSSTOP00000010542	ENSSTOP00000024729	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Unc-51 like autophagy activating kinase 2.	0.958
ATG12	VDAC1	ENSSTOP00000010542	ENSSTOP00000006945	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Voltage dependent anion channel 1.	0.746
ATG5	ATG12	ENSSTOP00000014775	ENSSTOP00000010542	Autophagy protein 5; Involved in autophagic vesicle formation.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.999
ATG5	ENSSTOP00000028723	ENSSTOP00000014775	ENSSTOP00000028723	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.688
ATG5	FUNDC1	ENSSTOP00000014775	ENSSTOP00000016103	Autophagy protein 5; Involved in autophagic vesicle formation.	FUN14 domain containing 1.	0.710
ATG5	Fundc2	ENSSTOP00000014775	ENSSTOP00000006973	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.688
ATG5	I3MNM5_ICTTR	ENSSTOP00000014775	ENSSTOP00000013279	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.850