26 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSTOP00000029771	AAA domain-containing protein. (336 aa)
	ENSSTOP00000028703	Ubiquitin-like domain-containing protein. (122 aa)
	Polk	UmuC domain-containing protein. (541 aa)
	RPA3	Replication protein A3. (121 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)
	LOC101973038	UmuC domain-containing protein. (265 aa)
	REV3L	REV3 like, DNA directed polymerase zeta catalytic subunit. (3127 aa)
	Rfc5	AAA domain-containing protein. (340 aa)
	Pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	MEIOB	Meiosis specific with OB-fold. (471 aa)
	LOC101966763	Ubiquitin-like domain-containing protein. (156 aa)
	RFC2	Replication factor C subunit 2. (321 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (592 aa)
	I3MUA8_ICTTR	AAA domain-containing protein. (312 aa)
	I3MU87_ICTTR	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (250 aa)
	ATAD5	ATPase family AAA domain containing 5. (1897 aa)
	RCBTB2	RCC1 and BTB domain containing protein 2. (551 aa)
	REV1	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1246 aa)
	Rfc4	AAA domain-containing protein. (364 aa)
	MAD2L2	Mitotic arrest deficient 2 like 2. (211 aa)
	Rps27a	Ubiquitin-like domain-containing protein. (156 aa)
	RFC1	Replication factor C subunit 1. (1118 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
	RPA2	Replication protein A2. (271 aa)
	RFC3	Replication factor C subunit 3. (339 aa)
	ENSSTOP00000031366	Ubiquitin-like domain-containing protein. (95 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATAD5	ENSSTOP00000029771	ENSSTOP00000015615	ENSSTOP00000029771	ATPase family AAA domain containing 5.	AAA domain-containing protein.	0.985
ATAD5	ENSSTOP00000031366	ENSSTOP00000015615	ENSSTOP00000031366	ATPase family AAA domain containing 5.	Ubiquitin-like domain-containing protein.	0.584
ATAD5	I3MU87_ICTTR	ENSSTOP00000015615	ENSSTOP00000015682	ATPase family AAA domain containing 5.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.979
ATAD5	I3MUA8_ICTTR	ENSSTOP00000015615	ENSSTOP00000015703	ATPase family AAA domain containing 5.	AAA domain-containing protein.	0.984
ATAD5	LOC101966763	ENSSTOP00000015615	ENSSTOP00000019666	ATPase family AAA domain containing 5.	Ubiquitin-like domain-containing protein.	0.584
ATAD5	LOC101973038	ENSSTOP00000015615	ENSSTOP00000025828	ATPase family AAA domain containing 5.	UmuC domain-containing protein.	0.664
ATAD5	MAD2L2	ENSSTOP00000015615	ENSSTOP00000008936	ATPase family AAA domain containing 5.	Mitotic arrest deficient 2 like 2.	0.726
ATAD5	MEIOB	ENSSTOP00000015615	ENSSTOP00000022367	ATPase family AAA domain containing 5.	Meiosis specific with OB-fold.	0.823
ATAD5	Pcna	ENSSTOP00000015615	ENSSTOP00000022388	ATPase family AAA domain containing 5.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.979
ATAD5	Polk	ENSSTOP00000015615	ENSSTOP00000028383	ATPase family AAA domain containing 5.	UmuC domain-containing protein.	0.664
ATAD5	REV1	ENSSTOP00000015615	ENSSTOP00000012850	ATPase family AAA domain containing 5.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.746
ATAD5	REV3L	ENSSTOP00000015615	ENSSTOP00000025414	ATPase family AAA domain containing 5.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.854
ATAD5	RFC1	ENSSTOP00000015615	ENSSTOP00000006348	ATPase family AAA domain containing 5.	Replication factor C subunit 1.	0.776
ATAD5	RFC2	ENSSTOP00000015615	ENSSTOP00000017844	ATPase family AAA domain containing 5.	Replication factor C subunit 2.	0.994
ATAD5	RFC3	ENSSTOP00000015615	ENSSTOP00000000340	ATPase family AAA domain containing 5.	Replication factor C subunit 3.	0.996
ATAD5	RPA1	ENSSTOP00000015615	ENSSTOP00000016703	ATPase family AAA domain containing 5.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.823
ATAD5	RPA2	ENSSTOP00000015615	ENSSTOP00000003986	ATPase family AAA domain containing 5.	Replication protein A2.	0.705
ATAD5	RPA3	ENSSTOP00000015615	ENSSTOP00000026766	ATPase family AAA domain containing 5.	Replication protein A3.	0.732
ATAD5	Rfc4	ENSSTOP00000015615	ENSSTOP00000011304	ATPase family AAA domain containing 5.	AAA domain-containing protein.	0.985
ATAD5	Rfc5	ENSSTOP00000015615	ENSSTOP00000024384	ATPase family AAA domain containing 5.	AAA domain-containing protein.	0.984