STRINGSTRING
I3NDT3_ICTTR I3NDT3_ICTTR RPS9 RPS9 RPS7 RPS7 RPS6 RPS6 I3NHA3_ICTTR I3NHA3_ICTTR I3NHC9_ICTTR I3NHC9_ICTTR Eif1ax Eif1ax RSRC1 RSRC1 LOC101956595 LOC101956595 ENSSTOP00000024198 ENSSTOP00000024198 Rps3 Rps3 ENSSTOP00000024467 ENSSTOP00000024467 LOC101966390 LOC101966390 ENSSTOP00000024943 ENSSTOP00000024943 RPS16 RPS16 ENSSTOP00000025282 ENSSTOP00000025282 Rps27 Rps27 Rps12 Rps12 LOC101962169 LOC101962169 Rps24 Rps24 ENSSTOP00000026557 ENSSTOP00000026557 RPS10 RPS10 ENSSTOP00000026893 ENSSTOP00000026893 LOC101961988 LOC101961988 ENSSTOP00000027796 ENSSTOP00000027796 ENSSTOP00000028121 ENSSTOP00000028121 ENSSTOP00000028153 ENSSTOP00000028153 ENSSTOP00000028192 ENSSTOP00000028192 ENSSTOP00000028512 ENSSTOP00000028512 ENSSTOP00000028526 ENSSTOP00000028526 ENSSTOP00000028566 ENSSTOP00000028566 LOC101971714 LOC101971714 ENSSTOP00000028703 ENSSTOP00000028703 LOC101967708 LOC101967708 ENSSTOP00000029116 ENSSTOP00000029116 EIF3K EIF3K ENSSTOP00000029265 ENSSTOP00000029265 ENSSTOP00000029274 ENSSTOP00000029274 ENSSTOP00000029436 ENSSTOP00000029436 EIF3I EIF3I ENSSTOP00000029748 ENSSTOP00000029748 EIF3M EIF3M EIF3J EIF3J ENSSTOP00000031405 ENSSTOP00000031405 ENSSTOP00000031529 ENSSTOP00000031529 RPS3A RPS3A RPS27L RPS27L ENSSTOP00000031836 ENSSTOP00000031836 LOC101973307 LOC101973307 ENSSTOP00000031876 ENSSTOP00000031876 ENSSTOP00000032021 ENSSTOP00000032021 RPS23 RPS23 Eif3l Eif3l RPS21 RPS21 EIF3H EIF3H EIF2S1 EIF2S1 I3LZZ8_ICTTR I3LZZ8_ICTTR RPS18 RPS18 EIF3A EIF3A Rps19 Rps19 UBA52 UBA52 Arl6ip1 Arl6ip1 Rps5 Rps5 RPS17 RPS17 Rps8 Rps8 RPS15 RPS15 RPS29 RPS29 Eif2s3 Eif2s3 EIF2S2 EIF2S2 EIF3E EIF3E Rps13 Rps13 Rps26 Rps26 EIF3D EIF3D RSAD1 RSAD1 Rps2 Rps2 Mrnip Mrnip Rpsa Rpsa EIF3F EIF3F LOC101966807 LOC101966807 Rps3a Rps3a LOC101970866 LOC101970866 EIF3G EIF3G Rps25 Rps25 I3MW39_ICTTR I3MW39_ICTTR I3MWX8_ICTTR I3MWX8_ICTTR I3N0F3_ICTTR I3N0F3_ICTTR LOC101955417 LOC101955417 I3N1W1_ICTTR I3N1W1_ICTTR EIF3B EIF3B RPS28 RPS28 Rps15a Rps15a I3N572_ICTTR I3N572_ICTTR I3N654_ICTTR I3N654_ICTTR MICALL2 MICALL2 Rps4x Rps4x LOC101961406 LOC101961406 RPS11 RPS11 RPS14 RPS14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I3NDT3_ICTTR40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
RPS9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (145 aa)
RPS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (219 aa)
I3NHA3_ICTTR40S_SA_C domain-containing protein. (256 aa)
I3NHC9_ICTTR40S ribosomal protein S27. (84 aa)
Eif1axEukaryotic translation initiation factor 1A X-linked; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (180 aa)
RSRC1Arginine and serine rich coiled-coil 1. (333 aa)
LOC101956595Uncharacterized protein. (84 aa)
ENSSTOP00000024198Ribosomal_S13_N domain-containing protein. (132 aa)
Rps3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (244 aa)
ENSSTOP0000002446740S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (233 aa)
LOC101966390S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (271 aa)
ENSSTOP00000024943Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (125 aa)
RPS16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
ENSSTOP00000025282Ribosomal_S5_C domain-containing protein. (68 aa)
Rps2740S ribosomal protein S27. (84 aa)
Rps12Uncharacterized protein. (97 aa)
LOC101962169Uncharacterized protein. (83 aa)
Rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
ENSSTOP00000026557S4 RNA-binding domain-containing protein. (216 aa)
RPS10Ribosomal protein S10. (165 aa)
ENSSTOP00000026893Uncharacterized protein. (92 aa)
LOC101961988Ribosomal_S10 domain-containing protein. (112 aa)
ENSSTOP00000027796Uncharacterized protein. (96 aa)
ENSSTOP0000002812140S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (236 aa)
ENSSTOP0000002815340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (218 aa)
ENSSTOP00000028192Uncharacterized protein. (56 aa)
ENSSTOP00000028512Uncharacterized protein. (129 aa)
ENSSTOP00000028526Uncharacterized protein. (149 aa)
ENSSTOP00000028566S5 DRBM domain-containing protein. (78 aa)
LOC10197171440S ribosomal protein S27. (84 aa)
ENSSTOP00000028703Ubiquitin-like domain-containing protein. (122 aa)
LOC101967708Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (127 aa)
ENSSTOP0000002911640S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (104 aa)
EIF3KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (218 aa)
ENSSTOP0000002926540S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (125 aa)
ENSSTOP00000029274Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (143 aa)
ENSSTOP00000029436Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (151 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (325 aa)
ENSSTOP00000029748Uncharacterized protein. (185 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (374 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (263 aa)
ENSSTOP0000003140540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (110 aa)
ENSSTOP0000003152940S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (254 aa)
RPS3A40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (244 aa)
RPS27L40S ribosomal protein S27. (109 aa)
ENSSTOP00000031836Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (200 aa)
LOC101973307Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (126 aa)
ENSSTOP00000031876Tr-type G domain-containing protein. (304 aa)
ENSSTOP0000003202140S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (235 aa)
RPS23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
Eif3lPCI domain-containing protein. (188 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (352 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit alpha. (315 aa)
I3LZZ8_ICTTR40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (223 aa)
RPS18Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (151 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (1254 aa)
Rps19Ribosomal protein S19. (145 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
Arl6ip1ADP ribosylation factor like GTPase 6 interacting protein 1. (203 aa)
Rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
RPS17Ribosomal protein S17. (135 aa)
Rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
RPS15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
RPS29Uncharacterized protein. (54 aa)
Eif2s3Tr-type G domain-containing protein. (472 aa)
EIF2S2Eukaryotic translation initiation factor 2 subunit beta. (341 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (445 aa)
Rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
Rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, a complex required for several steps in the initiation of protein synthesis of a specialized repertoire of mRNAs. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl- tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required [...] (548 aa)
RSAD1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (442 aa)
Rps2S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (293 aa)
MrnipUncharacterized protein. (223 aa)
Rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (362 aa)
LOC101966807Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (913 aa)
Rps3a40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
LOC10197086640S ribosomal protein S3a. (264 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (320 aa)
Rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
I3MW39_ICTTRUncharacterized protein. (109 aa)
I3MWX8_ICTTR40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (253 aa)
I3N0F3_ICTTR40S_SA_C domain-containing protein; Belongs to the universal ribosomal protein uS2 family. (281 aa)
LOC10195541740S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
I3N1W1_ICTTR40S_SA_C domain-containing protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (273 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form [...] (720 aa)
RPS28Ribosomal protein S28. (69 aa)
Rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
I3N572_ICTTR40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (124 aa)
I3N654_ICTTR40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
MICALL2MICAL like 2. (971 aa)
Rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (256 aa)
LOC101961406Uncharacterized protein. (172 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
RPS14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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