STRINGSTRING
Rps4x Rps4x LOC101966884 LOC101966884 ENSSTOP00000032021 ENSSTOP00000032021 RPS16 RPS16 LOC101973307 LOC101973307 ENSSTOP00000031876 ENSSTOP00000031876 ENSSTOP00000031836 ENSSTOP00000031836 RPS27L RPS27L RPS3A RPS3A ENSSTOP00000031529 ENSSTOP00000031529 ENSSTOP00000031405 ENSSTOP00000031405 EIF4A1 EIF4A1 EIF3J EIF3J EIF3M EIF3M ENSSTOP00000030302 ENSSTOP00000030302 ENSSTOP00000029978 ENSSTOP00000029978 ENSSTOP00000029748 ENSSTOP00000029748 EIF3I EIF3I ENSSTOP00000029436 ENSSTOP00000029436 ENSSTOP00000029274 ENSSTOP00000029274 ENSSTOP00000029265 ENSSTOP00000029265 EIF3K EIF3K ENSSTOP00000029116 ENSSTOP00000029116 LOC101967708 LOC101967708 ENSSTOP00000028703 ENSSTOP00000028703 LOC101971714 LOC101971714 ENSSTOP00000028566 ENSSTOP00000028566 ENSSTOP00000028526 ENSSTOP00000028526 ENSSTOP00000028512 ENSSTOP00000028512 ENSSTOP00000028192 ENSSTOP00000028192 ENSSTOP00000028153 ENSSTOP00000028153 ENSSTOP00000028121 ENSSTOP00000028121 ENSSTOP00000027796 ENSSTOP00000027796 ENSSTOP00000027577 ENSSTOP00000027577 EIF4G1 EIF4G1 LOC101961988 LOC101961988 ENSSTOP00000026893 ENSSTOP00000026893 RPS10 RPS10 ENSSTOP00000026557 ENSSTOP00000026557 Rps24 Rps24 LOC101962169 LOC101962169 Rps12 Rps12 Rps27 Rps27 ENSSTOP00000025282 ENSSTOP00000025282 Eif4a2 Eif4a2 ENSSTOP00000024943 ENSSTOP00000024943 LOC101966390 LOC101966390 ENSSTOP00000024467 ENSSTOP00000024467 Rps3 Rps3 ENSSTOP00000024198 ENSSTOP00000024198 LOC101956595 LOC101956595 RSRC1 RSRC1 Eif1ax Eif1ax I3NHC9_ICTTR I3NHC9_ICTTR I3NHA3_ICTTR I3NHA3_ICTTR RPS6 RPS6 RPS7 RPS7 RPS9 RPS9 I3NDT3_ICTTR I3NDT3_ICTTR RPS14 RPS14 RPS11 RPS11 LOC101961406 LOC101961406 EIF4H EIF4H MICALL2 MICALL2 I3N654_ICTTR I3N654_ICTTR I3N572_ICTTR I3N572_ICTTR Rps15a Rps15a RPS28 RPS28 EIF3B EIF3B I3N1W1_ICTTR I3N1W1_ICTTR LOC101955417 LOC101955417 I3N0F3_ICTTR I3N0F3_ICTTR I3MWX8_ICTTR I3MWX8_ICTTR I3MW39_ICTTR I3MW39_ICTTR Rps25 Rps25 EIF3G EIF3G LOC101970866 LOC101970866 Rps3a Rps3a LOC101966807 LOC101966807 EIF3F EIF3F Rpsa Rpsa Mrnip Mrnip Rps2 Rps2 RSAD1 RSAD1 EIF3D EIF3D Rps26 Rps26 Rps13 Rps13 EIF3E EIF3E EIF2S2 EIF2S2 Eif2s3 Eif2s3 RPS29 RPS29 Eif4b Eif4b RPS15 RPS15 Rps8 Rps8 RPS17 RPS17 Rps5 Rps5 Arl6ip1 Arl6ip1 UBA52 UBA52 EIF5 EIF5 Rps19 Rps19 EIF3A EIF3A RPS18 RPS18 EIF4E EIF4E I3LZZ8_ICTTR I3LZZ8_ICTTR EIF4E1B EIF4E1B EIF2S1 EIF2S1 EIF3H EIF3H RPS21 RPS21 Eif3l Eif3l RPS23 RPS23
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (256 aa)
LOC101966884RRM domain-containing protein. (594 aa)
ENSSTOP0000003202140S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (235 aa)
RPS16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
LOC101973307Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (126 aa)
ENSSTOP00000031876Tr-type G domain-containing protein. (304 aa)
ENSSTOP00000031836Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (200 aa)
RPS27L40S ribosomal protein S27. (109 aa)
RPS3A40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (244 aa)
ENSSTOP0000003152940S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (254 aa)
ENSSTOP0000003140540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (110 aa)
EIF4A1Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (406 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (263 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (374 aa)
ENSSTOP00000030302Q_MOTIF domain-containing protein. (85 aa)
ENSSTOP00000029978Uncharacterized protein. (362 aa)
ENSSTOP00000029748Uncharacterized protein. (185 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (325 aa)
ENSSTOP00000029436Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (151 aa)
ENSSTOP00000029274Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (143 aa)
ENSSTOP0000002926540S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (125 aa)
EIF3KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (218 aa)
ENSSTOP0000002911640S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (104 aa)
LOC101967708Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (127 aa)
ENSSTOP00000028703Ubiquitin-like domain-containing protein. (122 aa)
LOC10197171440S ribosomal protein S27. (84 aa)
ENSSTOP00000028566S5 DRBM domain-containing protein. (78 aa)
ENSSTOP00000028526Uncharacterized protein. (149 aa)
ENSSTOP00000028512Uncharacterized protein. (129 aa)
ENSSTOP00000028192Uncharacterized protein. (56 aa)
ENSSTOP0000002815340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (218 aa)
ENSSTOP0000002812140S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (236 aa)
ENSSTOP00000027796Uncharacterized protein. (96 aa)
ENSSTOP00000027577Uncharacterized protein. (252 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1611 aa)
LOC101961988Ribosomal_S10 domain-containing protein. (112 aa)
ENSSTOP00000026893Uncharacterized protein. (92 aa)
RPS10Ribosomal protein S10. (165 aa)
ENSSTOP00000026557S4 RNA-binding domain-containing protein. (216 aa)
Rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
LOC101962169Uncharacterized protein. (83 aa)
Rps12Uncharacterized protein. (97 aa)
Rps2740S ribosomal protein S27. (84 aa)
ENSSTOP00000025282Ribosomal_S5_C domain-containing protein. (68 aa)
Eif4a2Uncharacterized protein; Belongs to the DEAD box helicase family. (408 aa)
ENSSTOP00000024943Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (125 aa)
LOC101966390S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (271 aa)
ENSSTOP0000002446740S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (233 aa)
Rps3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (244 aa)
ENSSTOP00000024198Ribosomal_S13_N domain-containing protein. (132 aa)
LOC101956595Uncharacterized protein. (84 aa)
RSRC1Arginine and serine rich coiled-coil 1. (333 aa)
Eif1axEukaryotic translation initiation factor 1A X-linked; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (180 aa)
I3NHC9_ICTTR40S ribosomal protein S27. (84 aa)
I3NHA3_ICTTR40S_SA_C domain-containing protein. (256 aa)
RPS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (219 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (145 aa)
RPS9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
I3NDT3_ICTTR40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
RPS14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
LOC101961406Uncharacterized protein. (172 aa)
EIF4HEukaryotic translation initiation factor 4H. (228 aa)
MICALL2MICAL like 2. (971 aa)
I3N654_ICTTR40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
I3N572_ICTTR40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (124 aa)
Rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
RPS28Ribosomal protein S28. (69 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form [...] (720 aa)
I3N1W1_ICTTR40S_SA_C domain-containing protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (273 aa)
LOC10195541740S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
I3N0F3_ICTTR40S_SA_C domain-containing protein; Belongs to the universal ribosomal protein uS2 family. (281 aa)
I3MWX8_ICTTR40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (253 aa)
I3MW39_ICTTRUncharacterized protein. (109 aa)
Rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (320 aa)
LOC10197086640S ribosomal protein S3a. (264 aa)
Rps3a40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
LOC101966807Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (913 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (362 aa)
Rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
MrnipUncharacterized protein. (223 aa)
Rps2S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (293 aa)
RSAD1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (442 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, a complex required for several steps in the initiation of protein synthesis of a specialized repertoire of mRNAs. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl- tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required [...] (548 aa)
Rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
Rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (445 aa)
EIF2S2Eukaryotic translation initiation factor 2 subunit beta. (341 aa)
Eif2s3Tr-type G domain-containing protein. (472 aa)
RPS29Uncharacterized protein. (54 aa)
Eif4bRRM domain-containing protein. (554 aa)
RPS15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
Rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
RPS17Ribosomal protein S17. (135 aa)
Rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
Arl6ip1ADP ribosylation factor like GTPase 6 interacting protein 1. (203 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (232 aa)
EIF5Eukaryotic translation initiation factor 5. (430 aa)
Rps19Ribosomal protein S19. (145 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (1254 aa)
RPS18Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (151 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (218 aa)
I3LZZ8_ICTTR40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (223 aa)
EIF4E1BEukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family. (241 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit alpha. (315 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (352 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
Eif3lPCI domain-containing protein. (188 aa)
RPS23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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