STRINGSTRING
TNR TNR GP1BB GP1BB Gstcd Gstcd NPNT NPNT MFF MFF DAG1 DAG1 AGRN AGRN COL6A3 COL6A3 ITGB7 ITGB7 SV2A SV2A DSPP DSPP Col6a1 Col6a1 COMP COMP LRRC26 LRRC26 Cd47 Cd47 SDC1 SDC1 THBS2 THBS2 Sspo Sspo ITGAV ITGAV ANGPTL1 ANGPTL1 OTOGL OTOGL ITGB4 ITGB4 COL6A2 COL6A2 OLFML2B OLFML2B I3N7U1_ICTTR I3N7U1_ICTTR COL4A2 COL4A2 MFAP4 MFAP4 FCN1 FCN1 Col9a3 Col9a3 VIT VIT Tnxb Tnxb TNC TNC DMP1 DMP1 FGL1 FGL1 SPP1 SPP1 LOC101962956 LOC101962956 LAMA5 LAMA5 Dhrsx Dhrsx LAMB3 LAMB3 ANGPTL2 ANGPTL2 FREM3 FREM3 RDH14 RDH14 EGFL6 EGFL6 VTN VTN EFCC1 EFCC1 ITGB8 ITGB8 DHX9 DHX9 VWF VWF ITGA11 ITGA11 CLN6 CLN6 ITGA3 ITGA3 VWA2 VWA2 ITGA10 ITGA10 FREM2 FREM2 SV2C SV2C ITGB1 ITGB1 RELN RELN CHAD CHAD SV2B SV2B FRAS1 FRAS1 COL1A2 COL1A2 TNN TNN ITGA2 ITGA2 ITGA1 ITGA1 ITGA7 ITGA7 ITGA4 ITGA4 HMMR HMMR ITGA9 ITGA9 SDC4 SDC4 USH2A USH2A THBS4 THBS4 LAMC2 LAMC2 LAMC1 LAMC1 LAMA2 LAMA2 LAMA1 LAMA1 ITGB6 ITGB6 ITGA5 ITGA5 ITGB5 ITGB5 OLFML2A OLFML2A PCNT PCNT ITGA8 ITGA8 LAMA3 LAMA3 AKAP9 AKAP9 ITGA6 ITGA6 Dgcr6l Dgcr6l COL9A2 COL9A2 LAMA4 LAMA4 COL9A1 COL9A1 LRRC15 LRRC15 COL4A1 COL4A1 ITGA2B ITGA2B COL4A6 COL4A6 FIBCD1 FIBCD1 FREM1 FREM1 ITGBL1 ITGBL1 Itgb3 Itgb3 FN1 FN1 HSPG2 HSPG2 I3LZQ3_ICTTR I3LZQ3_ICTTR APBB3 APBB3 COL2A1 COL2A1 LAMB2 LAMB2 UMOD UMOD Gp2 Gp2 IBSP IBSP THBS1 THBS1 RDH13 RDH13 Cd44 Cd44 COCH COCH COL4A4 COL4A4 LAMB1 LAMB1 FGL2 FGL2 OTOG OTOG COL1A1 COL1A1 CD36 CD36 LAMB4 LAMB4 THBS3 THBS3 COL6A6 COL6A6 LAMC3 LAMC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TNRTenascin R. (1358 aa)
GP1BBGlycoprotein Ib platelet subunit beta. (202 aa)
GstcdMethyltranfer_dom domain-containing protein. (218 aa)
NPNTNephronectin. (612 aa)
MFFMitochondrial fission factor. (316 aa)
DAG1Dystroglycan 1. (895 aa)
AGRNAgrin. (1964 aa)
COL6A3Collagen type VI alpha 3 chain. (3203 aa)
ITGB7Integrin beta; Belongs to the integrin beta chain family. (808 aa)
SV2ASynaptic vesicle glycoprotein 2A. (741 aa)
DSPPDentin sialophosphoprotein. (1075 aa)
Col6a1Uncharacterized protein. (998 aa)
COMPCartilage oligomeric matrix protein. (756 aa)
LRRC26Leucine rich repeat containing 26. (334 aa)
Cd47Uncharacterized protein. (204 aa)
SDC1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (311 aa)
THBS2Thrombospondin 2. (1173 aa)
SspoSCO-spondin. (4969 aa)
ITGAVIntegrin subunit alpha V; Belongs to the integrin alpha chain family. (1077 aa)
ANGPTL1Angiopoietin like 1. (491 aa)
OTOGLOtogelin like. (2284 aa)
ITGB4Integrin beta. (1796 aa)
COL6A2Collagen type VI alpha 2 chain. (1020 aa)
OLFML2BOlfactomedin like 2B. (751 aa)
I3N7U1_ICTTRUncharacterized protein. (295 aa)
COL4A2Collagen type IV alpha 2 chain. (1712 aa)
MFAP4Microfibril associated protein 4. (256 aa)
FCN1Ficolin 1. (336 aa)
Col9a3Uncharacterized protein. (694 aa)
VITVitrin. (652 aa)
TnxbUncharacterized protein. (3000 aa)
TNCTenascin C. (2171 aa)
DMP1Dentin matrix acidic phosphoprotein 1. (477 aa)
FGL1Fibrinogen like 1. (303 aa)
SPP1Secreted phosphoprotein 1. (309 aa)
LOC101962956Uncharacterized protein. (2263 aa)
LAMA5Laminin subunit alpha 5. (3474 aa)
DhrsxUncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (307 aa)
LAMB3Laminin subunit beta 3. (1173 aa)
ANGPTL2Angiopoietin like 2. (493 aa)
FREM3FRAS1 related extracellular matrix 3. (1861 aa)
RDH14Retinol dehydrogenase 14; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (268 aa)
EGFL6EGF like domain multiple 6. (554 aa)
VTNSMB domain-containing protein. (466 aa)
EFCC1EF-hand and coiled-coil domain containing 1. (472 aa)
ITGB8Integrin beta; Belongs to the integrin beta chain family. (768 aa)
DHX9DExH-box helicase 9. (1328 aa)
VWFVon Willebrand factor. (2819 aa)
ITGA11Integrin subunit alpha 11; Belongs to the integrin alpha chain family. (1188 aa)
CLN6CLN6 transmembrane ER protein. (312 aa)
ITGA3Integrin subunit alpha 3; Belongs to the integrin alpha chain family. (1066 aa)
VWA2Von Willebrand factor A domain containing 2. (786 aa)
ITGA10Integrin subunit alpha 10; Belongs to the integrin alpha chain family. (1154 aa)
FREM2FRAS1 related extracellular matrix 2. (3171 aa)
SV2CSynaptic vesicle glycoprotein 2C. (727 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (798 aa)
RELNReelin. (3416 aa)
CHADChondroadherin. (359 aa)
SV2BSynaptic vesicle glycoprotein 2B. (683 aa)
FRAS1Fraser extracellular matrix complex subunit 1. (3927 aa)
COL1A2Collagen type I alpha 2 chain. (1366 aa)
TNNTenascin N. (1561 aa)
ITGA2Integrin subunit alpha 2; Belongs to the integrin alpha chain family. (1183 aa)
ITGA1Integrin subunit alpha 1; Belongs to the integrin alpha chain family. (1179 aa)
ITGA7Integrin subunit alpha 7; Belongs to the integrin alpha chain family. (1157 aa)
ITGA4Integrin subunit alpha 4; Belongs to the integrin alpha chain family. (1032 aa)
HMMRHyaluronan mediated motility receptor. (713 aa)
ITGA9Integrin subunit alpha 9; Belongs to the integrin alpha chain family. (1024 aa)
SDC4Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (176 aa)
USH2AUsherin. (5200 aa)
THBS4Thrombospondin 4. (961 aa)
LAMC2Laminin subunit gamma 2. (1192 aa)
LAMC1Laminin subunit gamma 1. (1608 aa)
LAMA2Laminin subunit alpha 2. (3117 aa)
LAMA1Laminin subunit alpha 1. (3004 aa)
ITGB6Integrin beta; Belongs to the integrin beta chain family. (786 aa)
ITGA5Integrin subunit alpha 5; Belongs to the integrin alpha chain family. (1105 aa)
ITGB5Integrin beta; Belongs to the integrin beta chain family. (801 aa)
OLFML2AOlfactomedin like 2A. (669 aa)
PCNTPericentrin. (3070 aa)
ITGA8Integrin subunit alpha 8; Belongs to the integrin alpha chain family. (1066 aa)
LAMA3Laminin subunit alpha 3. (3296 aa)
AKAP9A-kinase anchoring protein 9. (3713 aa)
ITGA6Integrin subunit alpha 6; Belongs to the integrin alpha chain family. (1091 aa)
Dgcr6lUncharacterized protein. (198 aa)
COL9A2Collagen type IX alpha 2 chain. (688 aa)
LAMA4Laminin subunit alpha 4. (1813 aa)
COL9A1Collagen type IX alpha 1 chain. (921 aa)
LRRC15Leucine rich repeat containing 15. (576 aa)
COL4A1Collagen type IV alpha 1 chain. (1671 aa)
ITGA2BIntegrin subunit alpha 2b; Belongs to the integrin alpha chain family. (1036 aa)
COL4A6Collagen type IV alpha 6 chain. (1686 aa)
FIBCD1Fibrinogen C domain containing 1. (461 aa)
FREM1FRAS1 related extracellular matrix 1. (2062 aa)
ITGBL1Integrin subunit beta like 1. (494 aa)
Itgb3Integrin beta; Belongs to the integrin beta chain family. (792 aa)
FN1Fibronectin 1. (2474 aa)
HSPG2Heparan sulfate proteoglycan 2. (4368 aa)
I3LZQ3_ICTTRVWFA domain-containing protein. (403 aa)
APBB3Amyloid beta precursor protein binding family B member 3. (486 aa)
COL2A1Collagen type II alpha 1 chain. (1487 aa)
LAMB2Laminin subunit beta 2. (1846 aa)
UMODUromodulin. (671 aa)
Gp2ZP domain-containing protein. (528 aa)
IBSPIntegrin binding sialoprotein. (315 aa)
THBS1Thrombospondin 1. (1182 aa)
RDH13Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (340 aa)
Cd44Link domain-containing protein. (360 aa)
COCHCochlin. (550 aa)
COL4A4Collagen type IV alpha 4 chain. (1583 aa)
LAMB1Laminin subunit beta 1. (1785 aa)
FGL2Fibrinogen like 2. (439 aa)
OTOGOtogelin. (2885 aa)
COL1A1Collagen type I alpha 1 chain. (1268 aa)
CD36CD36 molecule; Belongs to the CD36 family. (473 aa)
LAMB4Laminin subunit beta 4. (1539 aa)
THBS3Thrombospondin 3. (956 aa)
COL6A6Collagen type VI alpha 6 chain. (2197 aa)
LAMC3Laminin subunit gamma 3. (1412 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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