STRINGSTRING
ispE ispE ppsA ppsA CKL_0088 CKL_0088 CKL_0089 CKL_0089 fabH1 fabH1 acp1 acp1 fabD fabD fabG1 fabG1 fabF fabF accB accB fabZ fabZ accC accC accD accD accA accA ispD ispD ilvE1 ilvE1 pyc pyc crt1 crt1 bcd bcd hbd1 hbd1 CKL_0616 CKL_0616 CKL_0633 CKL_0633 panB panB panC panC aroE1 aroE1 CKL_0848 CKL_0848 ppdK ppdK gyaR gyaR bioB1 bioB1 bioA bioA aroD aroD aroE2 aroE2 aroE3 aroE3 coaBC coaBC ldh ldh pta pta plsX plsX acpP acpP dxr dxr ispG ispG CKL_1527 CKL_1527 CKL_1565 CKL_1565 ispH ispH panD panD CKL_1654 CKL_1654 bioB2 bioB2 CKL_1732 CKL_1732 lplA lplA CKL_1782 CKL_1782 CKL_1828 CKL_1828 CKL_2037 CKL_2037 CKL_2064 CKL_2064 CKL_2101 CKL_2101 CKL_2208 CKL_2208 pdhC pdhC pdhA pdhA lipA2 lipA2 CKL_2324 CKL_2324 CKL_2356 CKL_2356 CKL_2378 CKL_2378 CKL_2404 CKL_2404 crt2 crt2 CKL_2541 CKL_2541 CKL_2546 CKL_2546 CKL_2570 CKL_2570 CKL_2571 CKL_2571 CKL_2599 CKL_2599 CKL_2707 CKL_2707 hbd2 hbd2 cat1 cat1 cat2 cat2 abfD abfD CKL_3022 CKL_3022 acp2 acp2 gabT gabT eno eno gpmI gpmI tpiA tpiA pgk pgk CKL_3422 CKL_3422 pgi pgi fabH2 fabH2 CKL_3515 CKL_3515 CKL_3524 CKL_3524 pyk pyk pfk1 pfk1 acpS acpS cat3 cat3 thlA1 thlA1 thlA2 thlA2 thlA3 thlA3 CKL_3749 CKL_3749 ispF ispF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ispEIspE; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (280 aa)
ppsAPpsA; Predicted phosphoenolpyruvate synthase. (877 aa)
CKL_0088Predicted acyl-acyl carrier protein thioesterase. (249 aa)
CKL_0089Predicted flavoprotein. (409 aa)
fabH1FabH1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (323 aa)
acp1Acp1; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (75 aa)
fabDFabD; malonyl-CoA-acyl carrier protein transacylase. (312 aa)
fabG1FabG1; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)
fabFFabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa)
accBAccB; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (170 aa)
fabZFabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (150 aa)
accCAccC; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (447 aa)
accDAccD; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (291 aa)
accAAccA; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (281 aa)
ispDIspD; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (231 aa)
ilvE1IlvE1; Predicted threonine dehydratase. (412 aa)
pycPyc; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1146 aa)
crt1Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
bcdBcd; butyryl-CoA dehydrogenase. (379 aa)
hbd1Hbd1; 3-hydroxybutyryl-CoA dehydrogenase. (282 aa)
CKL_0616Conserved hypothetical protein; Belongs to the UPF0597 family. (418 aa)
CKL_0633Acyl-CoA dehydrogenase, short-chain specific. (562 aa)
panBPanB; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (280 aa)
panCPanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (292 aa)
aroE1AroE1; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (269 aa)
CKL_0848Hypothetical protein. (316 aa)
ppdKPpdK; Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (880 aa)
gyaRGyaR; Predicted glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (329 aa)
bioB1BioB1; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (241 aa)
bioABioA; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (451 aa)
aroDAroD; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. (255 aa)
aroE2AroE2; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (290 aa)
aroE3AroE3; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (289 aa)
coaBCCoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (397 aa)
ldhHypothetical protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (315 aa)
ptaPta; Phosphotransacetylase. (333 aa)
plsXHypothetical protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (334 aa)
acpPHypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (77 aa)
dxrDxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (385 aa)
ispGIspG; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (349 aa)
CKL_1527Predicted polyketide synthase. (3072 aa)
CKL_1565Conserved hypothetical protein. (412 aa)
ispH4-hydroxy-3-methylbut-2-enyl diphosphate reductase-related protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (637 aa)
panDPanD; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (127 aa)
CKL_1654Phosphoenolpyruvate synthase-related protein. (772 aa)
bioB2BioB2; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (334 aa)
CKL_1732Predicted PKS acyltransferase domain. (424 aa)
lplALplA; Lipoate-protein ligase A. (330 aa)
CKL_1782Predicted FAD/FMN-containing dehydrogenase. (460 aa)
CKL_1828Hypothetical protein. (213 aa)
CKL_2037Conserved hypothetical protein. (213 aa)
CKL_2064Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
CKL_2101Conserved hypothetical protein. (401 aa)
CKL_2208Predicted 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (309 aa)
pdhCPdhC; Dihydrolipoyllysine-residue acetyltransferase (E2 component of pyruvatedehydrogenase complex). (444 aa)
pdhAPdhA; Pyruvate dehydrogenase E1 component, alpha subunit. (333 aa)
lipA2LipA2; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (287 aa)
CKL_2324Predicted 3-oxoacyl-[acyl-carrier-protein] synthase. (227 aa)
CKL_2356Predicted PKS acyl carrier. (421 aa)
CKL_2378Conserved hypothetical protein. (301 aa)
CKL_2404Predicted aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (452 aa)
crt2Crt2; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
CKL_2541Conserved hypothetical protein. (336 aa)
CKL_2546Conserved hypothetical protein. (408 aa)
CKL_2570Phosphoenolpyruvate synthase-related protein. (286 aa)
CKL_2571Phosphoenolpyruvate synthase-related protein. (405 aa)
CKL_2599Conserved hypothetical protein. (252 aa)
CKL_2707Conserved hypothetical protein. (210 aa)
hbd2Hbd2; Predicted 3-hydroxybutyryl-CoA dehydrogenase. (319 aa)
cat1Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family. (538 aa)
cat2Cat2; 4-hydroxybutyrate coenzyme A transferase; Belongs to the acetyl-CoA hydrolase/transferase family. (429 aa)
abfDAbfD; 4-hydroxybutyryl-CoA dehydratase. (484 aa)
CKL_3022Predicted acyl dehydratase. (139 aa)
acp2Acp2; Acyl carrier protein. (80 aa)
gabTGabT; 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (458 aa)
enoHypothetical protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (430 aa)
gpmIHypothetical protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (509 aa)
tpiAHypothetical protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (248 aa)
pgkHypothetical protein; Belongs to the phosphoglycerate kinase family. (398 aa)
CKL_3422Hypothetical protein. (211 aa)
pgiPgi; Glucose-6-phosphate isomerase; Belongs to the GPI family. (449 aa)
fabH2FabH2; Predicted 3-oxoacyl-synthase. (328 aa)
CKL_3515Predicted FAD/FMN-containing dehydrogenase. (468 aa)
CKL_3524Conserved hypothetical protein. (223 aa)
pykPyk; Pyruvate kinase; Belongs to the pyruvate kinase family. (585 aa)
pfk1Pfk1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (318 aa)
acpSAcpS; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (134 aa)
cat3Cat3; butyryl-CoA: acetate CoA transferase. (437 aa)
thlA1ThlA1; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
thlA2ThlA2; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
thlA3ThlA3; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
CKL_3749Phosphoenolpyruvate synthase-related protein. (874 aa)
ispFIspF; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (164 aa)
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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