STRINGSTRING
vanS vanS CKL_0038 CKL_0038 CKL_0149 CKL_0149 map1 map1 CKL_0389 CKL_0389 CKL_0406 CKL_0406 CKL_0561 CKL_0561 cheB1 cheB1 CKL_0612 CKL_0612 CKL_0652 CKL_0652 CKL_0656 CKL_0656 CKL_0663 CKL_0663 CKL_0686 CKL_0686 CKL_0687 CKL_0687 hemC hemC cbiE cbiE cbiT cbiT CKL_0759 CKL_0759 CKL_0806 CKL_0806 prmA prmA CKL_0931 CKL_0931 CKL_0965 CKL_0965 CKL_1028 CKL_1028 CKL_1056 CKL_1056 CKL_1071 CKL_1071 CKL_1099 CKL_1099 CKL_1101 CKL_1101 cheA1 cheA1 CKL_1271 CKL_1271 CKL_1290 CKL_1290 CKL_1322 CKL_1322 phoR phoR CKL_1358 CKL_1358 CKL_1360 CKL_1360 CKL_1374 CKL_1374 CKL_1375 CKL_1375 rimO rimO CKL_1449 CKL_1449 CKL_1466 CKL_1466 kdpD kdpD hprK hprK CKL_1494 CKL_1494 CKL_1523 CKL_1523 CKL_1642 CKL_1642 CKL_1681 CKL_1681 CKL_1736 CKL_1736 lplA lplA CKL_1789 CKL_1789 CKL_1851 CKL_1851 CKL_1868 CKL_1868 CKL_1918 CKL_1918 CKL_1966 CKL_1966 CKL_2023 CKL_2023 CKL_2045 CKL_2045 CKL_2079 CKL_2079 cheA2 cheA2 cheB2 cheB2 CKL_2145 CKL_2145 CKL_2263 CKL_2263 lipA2 lipA2 lipB lipB rotA rotA CKL_2319 CKL_2319 CKL_2343 CKL_2343 CKL_2349 CKL_2349 CKL_2364 CKL_2364 birA birA CKL_2425 CKL_2425 CKL_2438 CKL_2438 CKL_2444 CKL_2444 CKL_2547 CKL_2547 CKL_3832 CKL_3832 CKL_3840 CKL_3840 CKL_3841 CKL_3841 CKL_3842 CKL_3842 CKL_3853 CKL_3853 CKL_2612 CKL_2612 CKL_2620 CKL_2620 CKL_2622 CKL_2622 CKL_2642 CKL_2642 CKL_2707 CKL_2707 map2 map2 CKL_2806 CKL_2806 CKL_2859 CKL_2859 CKL_2860 CKL_2860 CKL_3004 CKL_3004 CKL_3038 CKL_3038 CKL_3043 CKL_3043 CKL_3045 CKL_3045 CKL_3069 CKL_3069 CKL_3093 CKL_3093 CKL_3112 CKL_3112 CKL_3117 CKL_3117 spoIIAB spoIIAB CKL_3278 CKL_3278 CKL_3318 CKL_3318 CKL_3320 CKL_3320 CKL_3340 CKL_3340 CKL_3368 CKL_3368 CKL_3393 CKL_3393 CKL_3399 CKL_3399 CKL_3422 CKL_3422 hypE hypE CKL_3553 CKL_3553 acpS acpS CKL_3600 CKL_3600 CKL_3638 CKL_3638 CKL_3639 CKL_3639 CKL_3704 CKL_3704 prmC prmC CKL_3710 CKL_3710 npdA npdA CKL_3831 CKL_3831
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vanSVanS; Sensor protein VanS. (384 aa)
CKL_0038Predicted sensory transduction histidine kinase. (478 aa)
CKL_0149Predicted sensory transduction histidine kinase. (471 aa)
map1Map1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (249 aa)
CKL_0389Two-component sensor kinase. (422 aa)
CKL_0406Predicted surface-layer protein. (422 aa)
CKL_0561Two component sensor kinase. (353 aa)
cheB1CheB1; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. (347 aa)
CKL_0612Predicted protein kinase. (243 aa)
CKL_0652Two component sensor kinase. (405 aa)
CKL_0656Predicted glycosyltransferase. (741 aa)
CKL_0663Conserved hypothetical protein. (541 aa)
CKL_0686Two component sensor kinase. (451 aa)
CKL_0687Two component sensor kinase. (318 aa)
hemCHemC; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (305 aa)
cbiECbiE; precorrin-6Y C(5)-methyltransferase. (204 aa)
cbiTCbiT; precorrin-6Y C(15)-methyltransferase. (186 aa)
CKL_0759Predicted acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (149 aa)
CKL_0806Hypothetical protein. (505 aa)
prmAPrmA; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (312 aa)
CKL_0931Predicted acetyltransferase. (178 aa)
CKL_0965Two component sensor kinase. (309 aa)
CKL_1028Predicted acetyltransferase. (184 aa)
CKL_1056Two component sensor kinase. (326 aa)
CKL_1071Predicted two-component sensor histidine kinase. (404 aa)
CKL_1099Predicted glycosyltransferase. (351 aa)
CKL_1101Predicted surface-layer protein. (737 aa)
cheA1CheA1; Chemotaxis protein CheA. (674 aa)
CKL_1271Hypothetical protein. (218 aa)
CKL_1290Predicted sensor kinase. (425 aa)
CKL_1322Hypothetical protein. (223 aa)
phoRPhoR; Predicted phosphate regulon sensor protein. (575 aa)
CKL_1358Predicted glycosyltransferase. (744 aa)
CKL_1360Two component sensor kinase. (453 aa)
CKL_1374Predicted serine/threonine protein phosphatase. (246 aa)
CKL_1375Predicted serine/threonine kinase. (638 aa)
rimOConserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (446 aa)
CKL_1449Conserved hypothetical protein. (427 aa)
CKL_1466Predicted sensor kinase. (437 aa)
kdpDKdpD; Sensor kinase. (898 aa)
hprKHprK; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, f [...] (308 aa)
CKL_1494Predicted sensory transduction histidine kinase. (461 aa)
CKL_1523Predicted phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (232 aa)
CKL_1642Predicted two component sensor kinase. (416 aa)
CKL_1681Predicted two component sensor kinase. (455 aa)
CKL_1736Predicted 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (228 aa)
lplALplA; Lipoate-protein ligase A. (330 aa)
CKL_1789Predicted signal transduction protein containing GGDEF domain. (289 aa)
CKL_1851Conserved hypothetical protein. (278 aa)
CKL_1868Conserved hypothetical protein. (443 aa)
CKL_1918Phage invertase/recombinase-related protein. (549 aa)
CKL_1966Conserved hypothetical protein. (443 aa)
CKL_2023Recombinase-related protein. (579 aa)
CKL_2045Conserved hypothetical protein. (344 aa)
CKL_2079Hypothetical protein. (765 aa)
cheA2CheA2; Chemotaxis histidine kinase. (692 aa)
cheB2CheB2; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (371 aa)
CKL_2145Two component sensor kinase. (413 aa)
CKL_2263Predicted sensory transduction histidine kinase. (663 aa)
lipA2LipA2; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (287 aa)
lipBLipB; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (233 aa)
rotARotA; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)
CKL_2319Predicted sensor kinase. (300 aa)
CKL_2343Conserved hypothetical protein. (302 aa)
CKL_2349Predicted sensory transduction histidine kinase. (509 aa)
CKL_2364Conserved hypothetical protein. (414 aa)
birABifunctional BirA-related protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (328 aa)
CKL_2425Conserved hypothetical protein. (508 aa)
CKL_2438Predicted sensory transduction histidine kinase. (219 aa)
CKL_2444Conserved hypothetical protein. (187 aa)
CKL_2547Two component sensor kinase. (351 aa)
CKL_3832Conserved hypothetical protein. (159 aa)
CKL_3840Conserved hypothetical protein. (549 aa)
CKL_3841Conserved hypothetical protein. (283 aa)
CKL_3842Conserved hypothetical protein. (524 aa)
CKL_3853Predicted sensory transduction kinase. (307 aa)
CKL_2612Predicted sensory transduction histidine kinase. (329 aa)
CKL_2620Conserved hypothetical protein. (523 aa)
CKL_2622Conserved hypothetical protein. (529 aa)
CKL_2642Phage portal protein. (414 aa)
CKL_2707Conserved hypothetical protein. (210 aa)
map2Map2; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (251 aa)
CKL_2806Predicted sensor protein. (621 aa)
CKL_2859Predicted recombinase. (280 aa)
CKL_2860Predicted recombinase. (214 aa)
CKL_3004Predicted sensory transduction histidine kinase. (437 aa)
CKL_3038Conserved hypothetical protein. (197 aa)
CKL_3043Predicted sensory transduction histidine kinase. (342 aa)
CKL_3045Predicted sensory transduction histidine kinase. (470 aa)
CKL_3069Conserved hypothetical protein. (584 aa)
CKL_3093Conserved hypothetical protein. (211 aa)
CKL_3112Predicted sensor kinase. (321 aa)
CKL_3117Predicted sensor kinase. (617 aa)
spoIIABSpoIIAB; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (142 aa)
CKL_3278Conserved hypothetical protein. (471 aa)
CKL_3318Predicted two-component sensor histidine kinase. (419 aa)
CKL_3320Recombinase-related protein. (546 aa)
CKL_3340Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. (350 aa)
CKL_3368Predicted two-component sensor histidine kinase. (438 aa)
CKL_3393Hypothetical protein. (346 aa)
CKL_3399Hypothetical protein. (493 aa)
CKL_3422Hypothetical protein. (211 aa)
hypEHypE; Predicted hydrogenase maturation factor. (329 aa)
CKL_3553Predicted sensory transduction histidine kinase. (345 aa)
acpSAcpS; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (134 aa)
CKL_3600Conserved hypothetical protein. (179 aa)
CKL_3638Predicted signal transduction histidine kinase component. (287 aa)
CKL_3639Predicted signal transduction histidine kinase component. (290 aa)
CKL_3704Predicted protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (152 aa)
prmCPredicted methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (288 aa)
CKL_3710Conserved hypothetical protein. (310 aa)
npdANpdA; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (241 aa)
CKL_3831Conserved hypothetical protein. (164 aa)
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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