12 items (Clostridium kluyveri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cat2	Cat2; 4-hydroxybutyrate coenzyme A transferase; Belongs to the acetyl-CoA hydrolase/transferase family. (429 aa)
	cat3	Cat3; butyryl-CoA: acetate CoA transferase. (437 aa)
	thlA1	ThlA1; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
	thlA2	ThlA2; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	thlA3	ThlA3; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	ilvE1	IlvE1; Predicted threonine dehydratase. (412 aa)
	crt1	Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
	bcd	Bcd; butyryl-CoA dehydrogenase. (379 aa)
	hbd1	Hbd1; 3-hydroxybutyryl-CoA dehydrogenase. (282 aa)
	crt2	Crt2; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
	hbd2	Hbd2; Predicted 3-hydroxybutyryl-CoA dehydrogenase. (319 aa)
	cat1	Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family. (538 aa)

Your Current Organism:

Clostridium kluyveri

NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
bcd	cat3	CKL_0455	CKL_3595	Bcd; butyryl-CoA dehydrogenase.	Cat3; butyryl-CoA: acetate CoA transferase.	0.673
bcd	crt1	CKL_0455	CKL_0454	Bcd; butyryl-CoA dehydrogenase.	Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.996
bcd	crt2	CKL_0455	CKL_2527	Bcd; butyryl-CoA dehydrogenase.	Crt2; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.994
bcd	hbd1	CKL_0455	CKL_0458	Bcd; butyryl-CoA dehydrogenase.	Hbd1; 3-hydroxybutyryl-CoA dehydrogenase.	0.990
bcd	hbd2	CKL_0455	CKL_2795	Bcd; butyryl-CoA dehydrogenase.	Hbd2; Predicted 3-hydroxybutyryl-CoA dehydrogenase.	0.947
bcd	thlA1	CKL_0455	CKL_3696	Bcd; butyryl-CoA dehydrogenase.	ThlA1; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.984
bcd	thlA2	CKL_0455	CKL_3697	Bcd; butyryl-CoA dehydrogenase.	ThlA2; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.984
bcd	thlA3	CKL_0455	CKL_3698	Bcd; butyryl-CoA dehydrogenase.	ThlA3; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.971
cat1	cat2	CKL_3016	CKL_3018	Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family.	Cat2; 4-hydroxybutyrate coenzyme A transferase; Belongs to the acetyl-CoA hydrolase/transferase family.	0.493
cat1	crt2	CKL_3016	CKL_2527	Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family.	Crt2; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.579
cat1	thlA1	CKL_3016	CKL_3696	Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family.	ThlA1; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.914
cat1	thlA2	CKL_3016	CKL_3697	Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family.	ThlA2; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.914
cat1	thlA3	CKL_3016	CKL_3698	Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family.	ThlA3; acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.914
cat2	cat1	CKL_3018	CKL_3016	Cat2; 4-hydroxybutyrate coenzyme A transferase; Belongs to the acetyl-CoA hydrolase/transferase family.	Cat1; Forms succinyl-CoA from succinate and acetyl-CoA; Belongs to the acetyl-CoA hydrolase/transferase family.	0.493
cat2	cat3	CKL_3018	CKL_3595	Cat2; 4-hydroxybutyrate coenzyme A transferase; Belongs to the acetyl-CoA hydrolase/transferase family.	Cat3; butyryl-CoA: acetate CoA transferase.	0.901
cat3	bcd	CKL_3595	CKL_0455	Cat3; butyryl-CoA: acetate CoA transferase.	Bcd; butyryl-CoA dehydrogenase.	0.673
cat3	cat2	CKL_3595	CKL_3018	Cat3; butyryl-CoA: acetate CoA transferase.	Cat2; 4-hydroxybutyrate coenzyme A transferase; Belongs to the acetyl-CoA hydrolase/transferase family.	0.901
crt1	bcd	CKL_0454	CKL_0455	Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	Bcd; butyryl-CoA dehydrogenase.	0.996
crt1	crt2	CKL_0454	CKL_2527	Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	Crt2; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.905
crt1	hbd1	CKL_0454	CKL_0458	Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	Hbd1; 3-hydroxybutyryl-CoA dehydrogenase.	0.999