STRINGSTRING
CKL_2831 CKL_2831 CKL_3292 CKL_3292 CKL_3239 CKL_3239 CKL_3242 CKL_3242 CKL_2596 CKL_2596 CKL_2597 CKL_2597 CKL_2649 CKL_2649 CKL_2670 CKL_2670 CKL_2595 CKL_2595 CKL_1824 CKL_1824 CKL_0289 CKL_0289 CKL_2671 CKL_2671 cas2 cas2 cas1 cas1 CKL_2753 CKL_2753 CKL_2754 CKL_2754 CKL_2755 CKL_2755 CKL_2758 CKL_2758
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CKL_2831Conserved hypothetical protein. (78 aa)
CKL_3292Phage-related protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (302 aa)
CKL_3239Type III restriction-modification system, modification subunit. (656 aa)
CKL_3242Phage-related protein. (83 aa)
CKL_2596Type I restriction enzyme, endonuclease subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1069 aa)
CKL_2597Type I restriction enzyme, methylase subunit. (191 aa)
CKL_2649DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. (413 aa)
CKL_2670Conserved hypothetical protein. (399 aa)
CKL_2595Type I restriction enzyme, specificity subunit. (382 aa)
CKL_1824Hypothetical protein. (83 aa)
CKL_0289Conserved hypothetical protein. (70 aa)
CKL_2671Predicted DNA methylase. (416 aa)
cas2Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (94 aa)
cas1Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (334 aa)
CKL_2753Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (164 aa)
CKL_2754Conserved hypothetical protein. (860 aa)
CKL_2755Conserved hypothetical protein. (246 aa)
CKL_2758Conserved hypothetical protein. (236 aa)
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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