(6 nodes) PNPase/RNase PH domain superfamily network (Toxoplasma gondii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN1205_046610	3' exoribonuclease family, domain 1 domain-containing protein. (344 aa)
	TGVEG_231040	3' exoribonuclease family, domain 1 domain-containing protein. (341 aa)
	BN1205_010850	3' exoribonuclease family, domain 1 domain-containing protein. (303 aa)
	TGVEG_286550	Putative 3' exoribonuclease family domain 1 protein. (223 aa)
	BN1205_108080	3' exoribonuclease family, domain 1 domain-containing protein. (392 aa)
	TGVEG_213930	3' exoribonuclease family, domain 1 domain-containing protein. (503 aa)

Your Current Organism:

Toxoplasma gondii

NCBI taxonomy Id: 432359
Other names: T. gondii VEG, Toxoplasma gondii VEG

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN1205_010850	BN1205_046610	B9QI93	A0A125YQ07	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.972
BN1205_010850	TGVEG_213930	B9QI93	V4YRB2	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.954
BN1205_010850	TGVEG_231040	B9QI93	A0A125YV33	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.604
BN1205_010850	TGVEG_286550	B9QI93	A0A125YJ89	3' exoribonuclease family, domain 1 domain-containing protein.	Putative 3' exoribonuclease family domain 1 protein.	0.954
BN1205_046610	BN1205_010850	A0A125YQ07	B9QI93	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.972
BN1205_046610	BN1205_108080	A0A125YQ07	B6KRF0	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.965
BN1205_046610	TGVEG_213930	A0A125YQ07	V4YRB2	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.999
BN1205_046610	TGVEG_231040	A0A125YQ07	A0A125YV33	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.973
BN1205_046610	TGVEG_286550	A0A125YQ07	A0A125YJ89	3' exoribonuclease family, domain 1 domain-containing protein.	Putative 3' exoribonuclease family domain 1 protein.	0.999
BN1205_108080	BN1205_046610	B6KRF0	A0A125YQ07	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.965
BN1205_108080	TGVEG_213930	B6KRF0	V4YRB2	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.954
BN1205_108080	TGVEG_286550	B6KRF0	A0A125YJ89	3' exoribonuclease family, domain 1 domain-containing protein.	Putative 3' exoribonuclease family domain 1 protein.	0.954
TGVEG_213930	BN1205_010850	V4YRB2	B9QI93	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.954
TGVEG_213930	BN1205_046610	V4YRB2	A0A125YQ07	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.999
TGVEG_213930	BN1205_108080	V4YRB2	B6KRF0	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.954
TGVEG_213930	TGVEG_231040	V4YRB2	A0A125YV33	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.954
TGVEG_213930	TGVEG_286550	V4YRB2	A0A125YJ89	3' exoribonuclease family, domain 1 domain-containing protein.	Putative 3' exoribonuclease family domain 1 protein.	0.999
TGVEG_231040	BN1205_010850	A0A125YV33	B9QI93	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.604
TGVEG_231040	BN1205_046610	A0A125YV33	A0A125YQ07	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.973
TGVEG_231040	TGVEG_213930	A0A125YV33	V4YRB2	3' exoribonuclease family, domain 1 domain-containing protein.	3' exoribonuclease family, domain 1 domain-containing protein.	0.954