10 items (Populus alba) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4U5N7F9	26S proteasome non-ATPase regulatory subunit 12-like A-like. (442 aa)
	A0A4U5NA98	26S proteasome non-ATPase regulatory subunit family protein. (267 aa)
	A0A4U5NQE0	26S proteasome regulatory subunit 4-like A-like; Belongs to the AAA ATPase family. (445 aa)
	A0A4U5PRX1	26S proteasome non-ATPase regulatory subunit 4-like. (403 aa)
	A0A4U5Q547	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (890 aa)
	A0A4U5Q7Y9	PCI domain-containing protein. (386 aa)
	A0A4U5QBK8	PCI domain-containing protein. (437 aa)
	A0A4U5QGQ4	26S protease regulatory subunit 6B-like; Belongs to the AAA ATPase family. (412 aa)
	A0A4U5R1X2	MPN domain-containing protein. (310 aa)
	A0A4V6A426	26S proteasome regulatory subunit family protein. (386 aa)

Your Current Organism:

Populus alba

NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4U5N7F9	A0A4U5NA98	26S proteasome non-ATPase regulatory subunit 12-like A-like.	26S proteasome non-ATPase regulatory subunit family protein.	0.996
A0A4U5N7F9	A0A4U5NQE0	26S proteasome non-ATPase regulatory subunit 12-like A-like.	26S proteasome regulatory subunit 4-like A-like; Belongs to the AAA ATPase family.	0.998
A0A4U5N7F9	A0A4U5PRX1	26S proteasome non-ATPase regulatory subunit 12-like A-like.	26S proteasome non-ATPase regulatory subunit 4-like.	0.995
A0A4U5N7F9	A0A4U5Q547	26S proteasome non-ATPase regulatory subunit 12-like A-like.	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.996
A0A4U5N7F9	A0A4U5Q7Y9	26S proteasome non-ATPase regulatory subunit 12-like A-like.	PCI domain-containing protein.	0.998
A0A4U5N7F9	A0A4U5QBK8	26S proteasome non-ATPase regulatory subunit 12-like A-like.	PCI domain-containing protein.	0.996
A0A4U5N7F9	A0A4U5QGQ4	26S proteasome non-ATPase regulatory subunit 12-like A-like.	26S protease regulatory subunit 6B-like; Belongs to the AAA ATPase family.	0.995
A0A4U5N7F9	A0A4U5R1X2	26S proteasome non-ATPase regulatory subunit 12-like A-like.	MPN domain-containing protein.	0.998
A0A4U5N7F9	A0A4V6A426	26S proteasome non-ATPase regulatory subunit 12-like A-like.	26S proteasome regulatory subunit family protein.	0.994
A0A4U5NA98	A0A4U5N7F9	26S proteasome non-ATPase regulatory subunit family protein.	26S proteasome non-ATPase regulatory subunit 12-like A-like.	0.996
A0A4U5NA98	A0A4U5NQE0	26S proteasome non-ATPase regulatory subunit family protein.	26S proteasome regulatory subunit 4-like A-like; Belongs to the AAA ATPase family.	0.994
A0A4U5NA98	A0A4U5PRX1	26S proteasome non-ATPase regulatory subunit family protein.	26S proteasome non-ATPase regulatory subunit 4-like.	0.995
A0A4U5NA98	A0A4U5Q547	26S proteasome non-ATPase regulatory subunit family protein.	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.992
A0A4U5NA98	A0A4U5Q7Y9	26S proteasome non-ATPase regulatory subunit family protein.	PCI domain-containing protein.	0.994
A0A4U5NA98	A0A4U5QBK8	26S proteasome non-ATPase regulatory subunit family protein.	PCI domain-containing protein.	0.995
A0A4U5NA98	A0A4U5QGQ4	26S proteasome non-ATPase regulatory subunit family protein.	26S protease regulatory subunit 6B-like; Belongs to the AAA ATPase family.	0.996
A0A4U5NA98	A0A4U5R1X2	26S proteasome non-ATPase regulatory subunit family protein.	MPN domain-containing protein.	0.995
A0A4U5NA98	A0A4V6A426	26S proteasome non-ATPase regulatory subunit family protein.	26S proteasome regulatory subunit family protein.	0.995
A0A4U5NQE0	A0A4U5N7F9	26S proteasome regulatory subunit 4-like A-like; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 12-like A-like.	0.998
A0A4U5NQE0	A0A4U5NA98	26S proteasome regulatory subunit 4-like A-like; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit family protein.	0.994