Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDI_0018 | BDI_1468 | BDI_0018 | BDI_1468 | Capsular polysaccharide transport protein, putative. | Hypothetical protein. | 0.594 |
| BDI_0047 | BDI_0168 | BDI_0047 | BDI_0168 | Putative acetyltransferase. | Putative hydrolase. | 0.409 |
| BDI_0047 | BDI_0285 | BDI_0047 | BDI_0285 | Putative acetyltransferase. | 2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. | 0.505 |
| BDI_0047 | BDI_0384 | BDI_0047 | BDI_0384 | Putative acetyltransferase. | UDP-N-acetylglucosamine acetyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.765 |
| BDI_0047 | BDI_0953 | BDI_0047 | BDI_0953 | Putative acetyltransferase. | Putative membrane-associated phospholipid phosphatase. | 0.439 |
| BDI_0047 | BDI_2106 | BDI_0047 | BDI_2106 | Putative acetyltransferase. | acyl-(acyl-carrier-protein)-UDP-N- acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.773 |
| BDI_0047 | BDI_2288 | BDI_0047 | BDI_2288 | Putative acetyltransferase. | Glycosyltransferase family 30; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.971 |
| BDI_0047 | BDI_2631 | BDI_0047 | BDI_2631 | Putative acetyltransferase. | Putative deoxyoctulonosic acid synthetase. | 0.426 |
| BDI_0047 | BDI_2636 | BDI_0047 | BDI_2636 | Putative acetyltransferase. | Glycosyltransferase family 19, candidate lipid-alpha-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.785 |
| BDI_0047 | BDI_2819 | BDI_0047 | BDI_2819 | Putative acetyltransferase. | Glycosyltransferase family 9; Related to glycosyltransferases. | 0.443 |
| BDI_0047 | fabZ | BDI_0047 | BDI_2105 | Putative acetyltransferase. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.707 |
| BDI_0047 | kdsB | BDI_0047 | BDI_0522 | Putative acetyltransferase. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.462 |
| BDI_0047 | lpxD | BDI_0047 | BDI_2104 | Putative acetyltransferase. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.806 |
| BDI_0047 | lpxK | BDI_0047 | BDI_3942 | Putative acetyltransferase. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.777 |
| BDI_0076 | BDI_0077 | BDI_0076 | BDI_0077 | Putative biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Biotin carboxyl carrier protein. | 0.845 |
| BDI_0076 | BDI_0567 | BDI_0076 | BDI_0567 | Putative biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 3-oxoacyl-[acyl-carrier-protein] synthase. | 0.966 |
| BDI_0076 | BDI_0570 | BDI_0076 | BDI_0570 | Putative biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.411 |
| BDI_0076 | BDI_1496 | BDI_0076 | BDI_1496 | Putative biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.608 |
| BDI_0076 | BDI_1497 | BDI_0076 | BDI_1497 | Putative biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 3-oxoacyl-[acyl-carrier-protein] synthase III. | 0.962 |
| BDI_0076 | BDI_1760 | BDI_0076 | BDI_1760 | Putative biotin carboxylase 1; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Malonyl CoA-acyl carrier protein transacylase. | 0.980 |
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