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ALU41561.1 ALU41561.1 ALU43049.1 ALU43049.1 ALU43115.1 ALU43115.1 ALU43274.1 ALU43274.1 ALU43566.1 ALU43566.1 atpC atpC atpD atpD ALU43620.1 ALU43620.1 atpA atpA atpH atpH atpF atpF atpE atpE ALU43625.1 ALU43625.1 ALU43626.1 ALU43626.1 coxB coxB ctaD ctaD ALU43874.1 ALU43874.1 ALU43875.1 ALU43875.1 ALU43876.1 ALU43876.1 ALU43877.1 ALU43877.1 ALU43878.1 ALU43878.1 ALU43879.1 ALU43879.1 ALU43880.1 ALU43880.1 petA petA ALU43982.1 ALU43982.1 ALU43983.1 ALU43983.1 ALU45825.1 ALU45825.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALU41561.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
ALU43049.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
ALU43115.1Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology. (957 aa)
ALU43274.1Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
ALU43566.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
atpCATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (138 aa)
atpDATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (461 aa)
ALU43620.1ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
atpAATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (513 aa)
atpHATP F0F1 synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (177 aa)
atpFATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa)
atpEATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (77 aa)
ALU43625.1ATP synthase F0F1 subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
ALU43626.1ATP synthase F0F1; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
coxBCytochrome B559 subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
ctaDCytochrome oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (530 aa)
ALU43874.1Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
ALU43875.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
ALU43876.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
ALU43877.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
ALU43878.1Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
ALU43879.1Converts protoheme IX and farnesyl diphosphate to heme O; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
ALU43880.1Photosynthetic protein synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
petAUbiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (196 aa)
ALU43982.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (430 aa)
ALU43983.1Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
ALU45825.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
Your Current Organism:
Pseudoalteromonas rubra
NCBI taxonomy Id: 43658
Other names: ATCC 29570, Alteromonas rubra, CIP 104110, DSM 6842, LMG 2876, LMG:2876, P. rubra
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