STRINGSTRING
ALU43626.1 ALU43626.1 ALU43625.1 ALU43625.1 atpE atpE atpF atpF atpH atpH atpA atpA ALU43620.1 ALU43620.1 atpD atpD atpC atpC ALU45077.1 ALU45077.1 ALU43545.1 ALU43545.1 ALU43544.1 ALU43544.1 ALU43524.1 ALU43524.1 tatC tatC ALU43504.1 ALU43504.1 ALU43503.1 ALU43503.1 ALU43443.1 ALU43443.1 ALU43391.1 ALU43391.1 ALU43375.1 ALU43375.1 ALU43308.1 ALU43308.1 ALU43285.1 ALU43285.1 ALU41570.1 ALU41570.1 ALU41632.1 ALU41632.1 ccoO ccoO ccoN ccoN ALU41662.1 ALU41662.1 ALU41461.1 ALU41461.1 ALU41491.1 ALU41491.1 ALU41537.1 ALU41537.1 ALU41540.1 ALU41540.1 ALU41562.1 ALU41562.1 ALU44950.1 ALU44950.1 lolD lolD ALU41664.1 ALU41664.1 ALU41697.1 ALU41697.1 ALU41781.1 ALU41781.1 ALU41798.1 ALU41798.1 ALU41800.1 ALU41800.1 ALU41809.1 ALU41809.1 ALU42018.1 ALU42018.1 ALU42097.1 ALU42097.1 ALU42122.1 ALU42122.1 ALU42125.1 ALU42125.1 ALU42164.1 ALU42164.1 sdhB sdhB sdhA sdhA sdhC sdhC ALU42311.1 ALU42311.1 pal pal bamE bamE bamD bamD ALU42638.1 ALU42638.1 ALU42756.1 ALU42756.1 ALU42809.1 ALU42809.1 ALU42832.1 ALU42832.1 ALU42860.1 ALU42860.1 ALU42861.1 ALU42861.1 ALU42942.1 ALU42942.1 ALU45028.1 ALU45028.1 ALU43049.1 ALU43049.1 ALU43053.1 ALU43053.1 ALU43054.1 ALU43054.1 ALU45036.1 ALU45036.1 ALU43097.1 ALU43097.1 folK folK ALU45043.1 ALU45043.1 ALU43155.1 ALU43155.1 ALU43224.1 ALU43224.1 ALU43244.1 ALU43244.1 ALU45985.1 ALU45985.1 ALU45908.1 ALU45908.1 ALU45897.1 ALU45897.1 ALU45870.1 ALU45870.1 ALU45713.1 ALU45713.1 ALU45574.1 ALU45574.1 ALU45457.1 ALU45457.1 ALU45268.1 ALU45268.1 ALU45257.1 ALU45257.1 ALU45163.1 ALU45163.1 ALU44925.1 ALU44925.1 ALU44902.1 ALU44902.1 bamA bamA ALU44829.1 ALU44829.1 ALU44741.1 ALU44741.1 ALU44695.1 ALU44695.1 ALU44682.1 ALU44682.1 ALU44543.1 ALU44543.1 ALU44542.1 ALU44542.1 ALU44518.1 ALU44518.1 ALU44504.1 ALU44504.1 ALU44453.1 ALU44453.1 ALU44304.1 ALU44304.1 ALU44287.1 ALU44287.1 folK-2 folK-2 tolC tolC ALU44208.1 ALU44208.1 ALU44191.1 ALU44191.1 lptF lptF ALU44146.1 ALU44146.1 ALU44055.1 ALU44055.1 ALU44052.1 ALU44052.1 ALU44012.1 ALU44012.1 ALU44011.1 ALU44011.1 ALU43982.1 ALU43982.1 lptB lptB ALU43734.1 ALU43734.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALU43626.1ATP synthase F0F1; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
ALU43625.1ATP synthase F0F1 subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
atpEATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (77 aa)
atpFATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa)
atpHATP F0F1 synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (177 aa)
atpAATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (513 aa)
ALU43620.1ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
atpDATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (461 aa)
atpCATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (138 aa)
ALU45077.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
ALU43545.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2025 aa)
ALU43544.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
ALU43524.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
tatCWith TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
ALU43504.1Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
ALU43503.1Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
ALU43443.1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
ALU43391.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
ALU43375.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (576 aa)
ALU43308.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
ALU43285.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
ALU41570.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
ALU41632.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
ccoOPeptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
ccoNCytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
ALU41662.1Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
ALU41461.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
ALU41491.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
ALU41537.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
ALU41540.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
ALU41562.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
ALU44950.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
lolDABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
ALU41664.1Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
ALU41697.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
ALU41781.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (705 aa)
ALU41798.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
ALU41800.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
ALU41809.1Nucleoside-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
ALU42018.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
ALU42097.1MFP transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
ALU42122.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
ALU42125.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
ALU42164.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
sdhAPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa)
sdhCSuccinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
ALU42311.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
palPeptidoglycan-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
bamECell envelope protein SmpA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (119 aa)
bamDHypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (253 aa)
ALU42638.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
ALU42756.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
ALU42809.1Ion transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
ALU42832.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
ALU42860.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
ALU42861.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
ALU42942.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (565 aa)
ALU45028.1Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
ALU43049.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
ALU43053.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
ALU43054.1Curli production assembly protein CsgF; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
ALU45036.1Curli production assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)
ALU43097.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
folK2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
ALU45043.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
ALU43155.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
ALU43224.1Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
ALU43244.1Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (871 aa)
ALU45985.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
ALU45908.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
ALU45897.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
ALU45870.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (807 aa)
ALU45713.1MFP transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
ALU45574.1Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
ALU45457.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
ALU45268.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (7021 aa)
ALU45257.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
ALU45163.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (527 aa)
ALU44925.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (67 aa)
ALU44902.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
bamAPart of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. (823 aa)
ALU44829.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (69 aa)
ALU44741.1Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
ALU44695.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1120 aa)
ALU44682.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1114 aa)
ALU44543.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
ALU44542.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
ALU44518.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
ALU44504.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
ALU44453.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (802 aa)
ALU44304.1Voltage-gated chloride channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
ALU44287.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
folK-2Phosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
tolCTrimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
ALU44208.1Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
ALU44191.1LPS export ABC transporter permease LptG; With LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
lptFLPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
ALU44146.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
ALU44055.1Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
ALU44052.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (623 aa)
ALU44012.1Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
ALU44011.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
ALU43982.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (430 aa)
lptBLPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
ALU43734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
Your Current Organism:
Pseudoalteromonas rubra
NCBI taxonomy Id: 43658
Other names: ATCC 29570, Alteromonas rubra, CIP 104110, DSM 6842, LMG 2876, LMG:2876, P. rubra
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