(16 nodes) Mixed, incl. Small GTPase Rho, and PB1 domain network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_2000p5	Uncharacterized protein. (199 aa)
	Kpol_2002p104	Uncharacterized protein. (709 aa)
	Kpol_1055p24	Non-specific serine/threonine protein kinase. (937 aa)
	Kpol_1039p20	Uncharacterized protein. (210 aa)
	Kpol_1060p60	Uncharacterized protein. (310 aa)
	Kpol_1062p14	Uncharacterized protein. (1025 aa)
	Kpol_1041p7	Uncharacterized protein. (287 aa)
	Kpol_1024p45	Uncharacterized protein. (554 aa)
	Kpol_1052p32	Uncharacterized protein. (485 aa)
	Kpol_529p16	Uncharacterized protein. (191 aa)
	Kpol_529p25	Uncharacterized protein. (1061 aa)
	Kpol_1066p45	Non-specific serine/threonine protein kinase. (880 aa)
	Kpol_1008p17	Uncharacterized protein. (209 aa)
	Kpol_457p12	Uncharacterized protein. (567 aa)
	Kpol_1029p18	Uncharacterized protein. (188 aa)
	Kpol_367p2	Uncharacterized protein. (795 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1008p17	Kpol_1041p7	A7TPY1	A7TL74	Uncharacterized protein.	Uncharacterized protein.	0.514
Kpol_1008p17	Kpol_1052p32	A7TPY1	A7TM43	Uncharacterized protein.	Uncharacterized protein.	0.667
Kpol_1008p17	Kpol_1055p24	A7TPY1	A7TG99	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.618
Kpol_1008p17	Kpol_1060p60	A7TPY1	A7TK57	Uncharacterized protein.	Uncharacterized protein.	0.527
Kpol_1008p17	Kpol_1062p14	A7TPY1	A7TK71	Uncharacterized protein.	Uncharacterized protein.	0.999
Kpol_1008p17	Kpol_1066p45	A7TPY1	A7TMR4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.618
Kpol_1008p17	Kpol_2000p5	A7TPY1	A7TF16	Uncharacterized protein.	Uncharacterized protein.	0.819
Kpol_1008p17	Kpol_2002p104	A7TPY1	A7TFL8	Uncharacterized protein.	Uncharacterized protein.	0.541
Kpol_1008p17	Kpol_367p2	A7TPY1	A7TRQ3	Uncharacterized protein.	Uncharacterized protein.	0.607
Kpol_1008p17	Kpol_529p16	A7TPY1	A7TM69	Uncharacterized protein.	Uncharacterized protein.	0.513
Kpol_1008p17	Kpol_529p25	A7TPY1	A7TM78	Uncharacterized protein.	Uncharacterized protein.	0.991
Kpol_1024p45	Kpol_1039p20	A7TLK5	A7THE7	Uncharacterized protein.	Uncharacterized protein.	0.482
Kpol_1024p45	Kpol_1041p7	A7TLK5	A7TL74	Uncharacterized protein.	Uncharacterized protein.	0.597
Kpol_1024p45	Kpol_1055p24	A7TLK5	A7TG99	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.995
Kpol_1024p45	Kpol_1060p60	A7TLK5	A7TK57	Uncharacterized protein.	Uncharacterized protein.	0.597
Kpol_1024p45	Kpol_1062p14	A7TLK5	A7TK71	Uncharacterized protein.	Uncharacterized protein.	0.741
Kpol_1024p45	Kpol_1066p45	A7TLK5	A7TMR4	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.966
Kpol_1024p45	Kpol_367p2	A7TLK5	A7TRQ3	Uncharacterized protein.	Uncharacterized protein.	0.999
Kpol_1024p45	Kpol_457p12	A7TLK5	A7TQV3	Uncharacterized protein.	Uncharacterized protein.	0.907
Kpol_1024p45	Kpol_529p16	A7TLK5	A7TM69	Uncharacterized protein.	Uncharacterized protein.	0.986