STRINGSTRING
Kpol_1023p67 Kpol_1023p67 Kpol_1055p36 Kpol_1055p36 Kpol_1032p54 Kpol_1032p54 Kpol_1045p10 Kpol_1045p10 Kpol_1043p66 Kpol_1043p66 Kpol_1004p2 Kpol_1004p2 Kpol_534p14 Kpol_534p14 Kpol_1060p51 Kpol_1060p51 Kpol_1065p29 Kpol_1065p29 Kpol_479p16 Kpol_479p16 Kpol_1005p10 Kpol_1005p10 Kpol_348p6 Kpol_348p6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Kpol_1023p67RNA polymerase II transcription factor B subunit 3; Acts as component of the general transcription and DNA repair factor IIH (TFIIH or factor B), which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA. (311 aa)
Kpol_1055p36Uncharacterized protein. (72 aa)
Kpol_1032p54Helicase ATP-binding domain-containing protein. (776 aa)
Kpol_1045p10CYCLIN domain-containing protein; Belongs to the cyclin family. (372 aa)
Kpol_1043p66Uncharacterized protein. (856 aa)
Kpol_1004p2General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (497 aa)
Kpol_534p14Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (339 aa)
Kpol_1060p51TFIIE beta domain-containing protein. (329 aa)
Kpol_1065p29Uncharacterized protein. (107 aa)
Kpol_479p16RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (504 aa)
Kpol_1005p10Uncharacterized protein. (609 aa)
Kpol_348p6HTH TFE/IIEalpha-type domain-containing protein. (506 aa)
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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