(5 nodes) Mannan polymerase complex network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1018p186	Uncharacterized protein. (408 aa)
	Kpol_2002p62	Uncharacterized protein. (424 aa)
	Kpol_1031p65	Uncharacterized protein. (399 aa)
	Kpol_1031p78	Uncharacterized protein. (392 aa)
	Kpol_370p5	Uncharacterized protein. (645 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1018p186	Kpol_1031p65	A7TE26	A7THZ6	Uncharacterized protein.	Uncharacterized protein.	0.941
Kpol_1018p186	Kpol_1031p78	A7TE26	A7TI08	Uncharacterized protein.	Uncharacterized protein.	0.934
Kpol_1018p186	Kpol_2002p62	A7TE26	A7TFH7	Uncharacterized protein.	Uncharacterized protein.	0.929
Kpol_1018p186	Kpol_370p5	A7TE26	A7TSH8	Uncharacterized protein.	Uncharacterized protein.	0.925
Kpol_1031p65	Kpol_1018p186	A7THZ6	A7TE26	Uncharacterized protein.	Uncharacterized protein.	0.941
Kpol_1031p65	Kpol_1031p78	A7THZ6	A7TI08	Uncharacterized protein.	Uncharacterized protein.	0.998
Kpol_1031p65	Kpol_2002p62	A7THZ6	A7TFH7	Uncharacterized protein.	Uncharacterized protein.	0.983
Kpol_1031p65	Kpol_370p5	A7THZ6	A7TSH8	Uncharacterized protein.	Uncharacterized protein.	0.978
Kpol_1031p78	Kpol_1018p186	A7TI08	A7TE26	Uncharacterized protein.	Uncharacterized protein.	0.934
Kpol_1031p78	Kpol_1031p65	A7TI08	A7THZ6	Uncharacterized protein.	Uncharacterized protein.	0.998
Kpol_1031p78	Kpol_2002p62	A7TI08	A7TFH7	Uncharacterized protein.	Uncharacterized protein.	0.978
Kpol_1031p78	Kpol_370p5	A7TI08	A7TSH8	Uncharacterized protein.	Uncharacterized protein.	0.977
Kpol_2002p62	Kpol_1018p186	A7TFH7	A7TE26	Uncharacterized protein.	Uncharacterized protein.	0.929
Kpol_2002p62	Kpol_1031p65	A7TFH7	A7THZ6	Uncharacterized protein.	Uncharacterized protein.	0.983
Kpol_2002p62	Kpol_1031p78	A7TFH7	A7TI08	Uncharacterized protein.	Uncharacterized protein.	0.978
Kpol_2002p62	Kpol_370p5	A7TFH7	A7TSH8	Uncharacterized protein.	Uncharacterized protein.	0.982
Kpol_370p5	Kpol_1018p186	A7TSH8	A7TE26	Uncharacterized protein.	Uncharacterized protein.	0.925
Kpol_370p5	Kpol_1031p65	A7TSH8	A7THZ6	Uncharacterized protein.	Uncharacterized protein.	0.978
Kpol_370p5	Kpol_1031p78	A7TSH8	A7TI08	Uncharacterized protein.	Uncharacterized protein.	0.977
Kpol_370p5	Kpol_2002p62	A7TSH8	A7TFH7	Uncharacterized protein.	Uncharacterized protein.	0.982