(7 nodes) U4 snRNP, and Sm-like protein Lsm6/SmF network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1036p91	Small nuclear ribonucleoprotein Sm D3. (100 aa)
	Kpol_1013p34	Sm domain-containing protein. (84 aa)
	Kpol_1053p49	Uncharacterized protein. (66 aa)
	Kpol_1009p2	Small nuclear ribonucleoprotein Sm D2. (109 aa)
	Kpol_1011p12	Small nuclear ribonucleoprotein G. (76 aa)
	Kpol_423p14	Sm domain-containing protein. (175 aa)
	Kpol_218p3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (93 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1009p2	Kpol_1011p12	A7TPC8	A7TQW8	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein G.	0.999
Kpol_1009p2	Kpol_1013p34	A7TPC8	A7TH81	Small nuclear ribonucleoprotein Sm D2.	Sm domain-containing protein.	0.999
Kpol_1009p2	Kpol_1036p91	A7TPC8	A7TEN7	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
Kpol_1009p2	Kpol_1053p49	A7TPC8	A7TN92	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.999
Kpol_1009p2	Kpol_218p3	A7TPC8	A7TTI9	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Kpol_1009p2	Kpol_423p14	A7TPC8	A7TR91	Small nuclear ribonucleoprotein Sm D2.	Sm domain-containing protein.	0.999
Kpol_1011p12	Kpol_1009p2	A7TQW8	A7TPC8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
Kpol_1011p12	Kpol_1013p34	A7TQW8	A7TH81	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.999
Kpol_1011p12	Kpol_1036p91	A7TQW8	A7TEN7	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.999
Kpol_1011p12	Kpol_1053p49	A7TQW8	A7TN92	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.999
Kpol_1011p12	Kpol_218p3	A7TQW8	A7TTI9	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Kpol_1011p12	Kpol_423p14	A7TQW8	A7TR91	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.999
Kpol_1013p34	Kpol_1009p2	A7TH81	A7TPC8	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
Kpol_1013p34	Kpol_1011p12	A7TH81	A7TQW8	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.999
Kpol_1013p34	Kpol_1036p91	A7TH81	A7TEN7	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
Kpol_1013p34	Kpol_1053p49	A7TH81	A7TN92	Sm domain-containing protein.	Uncharacterized protein.	0.999
Kpol_1013p34	Kpol_218p3	A7TH81	A7TTI9	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Kpol_1013p34	Kpol_423p14	A7TH81	A7TR91	Sm domain-containing protein.	Sm domain-containing protein.	0.999
Kpol_1036p91	Kpol_1009p2	A7TEN7	A7TPC8	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D2.	0.999
Kpol_1036p91	Kpol_1011p12	A7TEN7	A7TQW8	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.999