(36 nodes) Kinetochore network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1018p78	Uncharacterized protein. (109 aa)
	Kpol_1018p149	Uncharacterized protein. (71 aa)
	Kpol_1018p151	Uncharacterized protein. (236 aa)
	Kpol_1002p72	Spc7 domain-containing protein. (847 aa)
	Kpol_1002p95	Uncharacterized protein. (84 aa)
	Kpol_1050p91	Uncharacterized protein. (345 aa)
	Kpol_2000p75	Uncharacterized protein. (236 aa)
	KRE28	Spindle pole body component KRE28; Required for kinetochore binding by a discrete subset of kMAPs and motors. Involved in kinetochore-microtubule binding and the spindle assembly checkpoint (By similarity); Belongs to the KRE28 family. (378 aa)
	Kpol_2002p87	Uncharacterized protein. (371 aa)
	Kpol_1028p97	Uncharacterized protein. (192 aa)
	Kpol_1032p20	Uncharacterized protein. (467 aa)
	Kpol_543p1	Uncharacterized protein. (242 aa)
	Kpol_1031p37	Uncharacterized protein. (284 aa)
	Kpol_1031p77	Uncharacterized protein. (456 aa)
	Kpol_1061p26	Zn(2)-C6 fungal-type domain-containing protein. (1274 aa)
	Kpol_1058p19	BZIP domain-containing protein. (223 aa)
	Kpol_1037p55	Uncharacterized protein. (82 aa)
	Kpol_1060p34	Uncharacterized protein. (268 aa)
	Kpol_1062p50	Uncharacterized protein. (168 aa)
	Kpol_1035p38	BZIP domain-containing protein. (361 aa)
	Kpol_1065p11	Uncharacterized protein. (287 aa)
	Kpol_1065p19	Uncharacterized protein. (241 aa)
	Kpol_1024p6	Uncharacterized protein. (176 aa)
	Kpol_1064p13	Uncharacterized protein. (289 aa)
	Kpol_1064p57	Uncharacterized protein. (154 aa)
	Kpol_1070p29	BZIP domain-containing protein. (581 aa)
	Kpol_478p18	Uncharacterized protein. (313 aa)
	Kpol_489p8	DUF5595 domain-containing protein. (705 aa)
	Kpol_483p9	Uncharacterized protein. (701 aa)
	Kpol_1063p3	BZIP domain-containing protein. (317 aa)
	Kpol_460p17	Uncharacterized protein. (351 aa)
	Kpol_1011p8	Uncharacterized protein. (376 aa)
	Kpol_461p5	Uncharacterized protein. (206 aa)
	Kpol_401p6	Uncharacterized protein. (558 aa)
	Kpol_339p14	Uncharacterized protein. (76 aa)
	Kpol_209p1	Uncharacterized protein. (1303 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRE28	Kpol_1002p72	A7TFD7	A7TEA3	Spindle pole body component KRE28; Required for kinetochore binding by a discrete subset of kMAPs and motors. Involved in kinetochore-microtubule binding and the spindle assembly checkpoint (By similarity); Belongs to the KRE28 family.	Spc7 domain-containing protein.	0.692
KRE28	Kpol_1060p34	A7TFD7	A7TK32	Spindle pole body component KRE28; Required for kinetochore binding by a discrete subset of kMAPs and motors. Involved in kinetochore-microtubule binding and the spindle assembly checkpoint (By similarity); Belongs to the KRE28 family.	Uncharacterized protein.	0.450
KRE28	Kpol_401p6	A7TFD7	A7TRA5	Spindle pole body component KRE28; Required for kinetochore binding by a discrete subset of kMAPs and motors. Involved in kinetochore-microtubule binding and the spindle assembly checkpoint (By similarity); Belongs to the KRE28 family.	Uncharacterized protein.	0.758
Kpol_1002p72	KRE28	A7TEA3	A7TFD7	Spc7 domain-containing protein.	Spindle pole body component KRE28; Required for kinetochore binding by a discrete subset of kMAPs and motors. Involved in kinetochore-microtubule binding and the spindle assembly checkpoint (By similarity); Belongs to the KRE28 family.	0.692
Kpol_1002p72	Kpol_1018p151	A7TEA3	A7TDZ2	Spc7 domain-containing protein.	Uncharacterized protein.	0.758
Kpol_1002p72	Kpol_1032p20	A7TEA3	A7TGX5	Spc7 domain-containing protein.	Uncharacterized protein.	0.671
Kpol_1002p72	Kpol_1060p34	A7TEA3	A7TK32	Spc7 domain-containing protein.	Uncharacterized protein.	0.586
Kpol_1002p72	Kpol_1065p11	A7TEA3	A7TL33	Spc7 domain-containing protein.	Uncharacterized protein.	0.563
Kpol_1002p72	Kpol_2000p75	A7TEA3	A7TF82	Spc7 domain-containing protein.	Uncharacterized protein.	0.570
Kpol_1002p72	Kpol_401p6	A7TEA3	A7TRA5	Spc7 domain-containing protein.	Uncharacterized protein.	0.917
Kpol_1002p72	Kpol_489p8	A7TEA3	A7TQ22	Spc7 domain-containing protein.	DUF5595 domain-containing protein.	0.603
Kpol_1002p95	Kpol_1018p149	A7TEC5	A7TDZ1	Uncharacterized protein.	Uncharacterized protein.	0.542
Kpol_1002p95	Kpol_1018p78	A7TEC5	A7TDS6	Uncharacterized protein.	Uncharacterized protein.	0.957
Kpol_1002p95	Kpol_1031p37	A7TEC5	A7THX1	Uncharacterized protein.	Uncharacterized protein.	0.969
Kpol_1002p95	Kpol_1037p55	A7TEC5	A7TJZ6	Uncharacterized protein.	Uncharacterized protein.	0.860
Kpol_1002p95	Kpol_1050p91	A7TEC5	A7TEY5	Uncharacterized protein.	Uncharacterized protein.	0.962
Kpol_1002p95	Kpol_1064p13	A7TEC5	A7TMD8	Uncharacterized protein.	Uncharacterized protein.	0.933
Kpol_1002p95	Kpol_1064p57	A7TEC5	A7TMI1	Uncharacterized protein.	Uncharacterized protein.	0.934
Kpol_1002p95	Kpol_339p14	A7TEC5	A7TSE2	Uncharacterized protein.	Uncharacterized protein.	0.766
Kpol_1002p95	Kpol_401p6	A7TEC5	A7TRA5	Uncharacterized protein.	Uncharacterized protein.	0.471