5 items (Vanderwaltozyma polyspora) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1045p72	Uncharacterized protein. (695 aa)
	Kpol_1033p19	Uncharacterized protein. (1139 aa)
	Kpol_520p18	Zinc_ribbon_16 domain-containing protein. (1004 aa)
	Kpol_1044p23	Uncharacterized protein. (960 aa)
	RTC1	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family. (1313 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1033p19	Kpol_1044p23	A7TJ16	A7TP53	Uncharacterized protein.	Uncharacterized protein.	0.998
Kpol_1033p19	Kpol_1045p72	A7TJ16	A7TI78	Uncharacterized protein.	Uncharacterized protein.	0.997
Kpol_1033p19	Kpol_520p18	A7TJ16	A7TMA3	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.999
Kpol_1033p19	RTC1	A7TJ16	A7TR10	Uncharacterized protein.	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	0.999
Kpol_1044p23	Kpol_1033p19	A7TP53	A7TJ16	Uncharacterized protein.	Uncharacterized protein.	0.998
Kpol_1044p23	Kpol_1045p72	A7TP53	A7TI78	Uncharacterized protein.	Uncharacterized protein.	0.998
Kpol_1044p23	Kpol_520p18	A7TP53	A7TMA3	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.978
Kpol_1044p23	RTC1	A7TP53	A7TR10	Uncharacterized protein.	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	0.997
Kpol_1045p72	Kpol_1033p19	A7TI78	A7TJ16	Uncharacterized protein.	Uncharacterized protein.	0.997
Kpol_1045p72	Kpol_1044p23	A7TI78	A7TP53	Uncharacterized protein.	Uncharacterized protein.	0.998
Kpol_1045p72	Kpol_520p18	A7TI78	A7TMA3	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.997
Kpol_1045p72	RTC1	A7TI78	A7TR10	Uncharacterized protein.	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	0.997
Kpol_520p18	Kpol_1033p19	A7TMA3	A7TJ16	Zinc_ribbon_16 domain-containing protein.	Uncharacterized protein.	0.999
Kpol_520p18	Kpol_1044p23	A7TMA3	A7TP53	Zinc_ribbon_16 domain-containing protein.	Uncharacterized protein.	0.978
Kpol_520p18	Kpol_1045p72	A7TMA3	A7TI78	Zinc_ribbon_16 domain-containing protein.	Uncharacterized protein.	0.997
Kpol_520p18	RTC1	A7TMA3	A7TR10	Zinc_ribbon_16 domain-containing protein.	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	0.999
RTC1	Kpol_1033p19	A7TR10	A7TJ16	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	Uncharacterized protein.	0.999
RTC1	Kpol_1044p23	A7TR10	A7TP53	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	Uncharacterized protein.	0.997
RTC1	Kpol_1045p72	A7TR10	A7TI78	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	Uncharacterized protein.	0.997
RTC1	Kpol_520p18	A7TR10	A7TMA3	Restriction of telomere capping protein 1; May be involved in a process influencing telomere capping. Belongs to the WD repeat RTC1 family.	Zinc_ribbon_16 domain-containing protein.	0.999