(10 nodes) Transcription, RNA-templated network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1036p23	Uncharacterized protein. (215 aa)
	Kpol_1051p32	Uncharacterized protein. (70 aa)
	Kpol_1059p24	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	Kpol_186p2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1223 aa)
	Kpol_186p3	Uncharacterized protein. (171 aa)
	Kpol_162p1	RPOLA_N domain-containing protein. (1311 aa)
	Kpol_1050p110	Uncharacterized protein. (153 aa)
	Kpol_1033p49	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
	Kpol_1037p21	RNA_pol_L_2 domain-containing protein. (120 aa)
	Kpol_1060p55	RPOL4c domain-containing protein. (221 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1033p49	Kpol_1036p23	A7TJ44	A7TEH4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.999
Kpol_1033p49	Kpol_1037p21	A7TJ44	A7TJW3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RNA_pol_L_2 domain-containing protein.	0.999
Kpol_1033p49	Kpol_1050p110	A7TJ44	A7TF04	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.999
Kpol_1033p49	Kpol_1051p32	A7TJ44	A7TMZ5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.999
Kpol_1033p49	Kpol_1059p24	A7TJ44	A7TN28	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Kpol_1033p49	Kpol_1060p55	A7TJ44	A7TK52	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RPOL4c domain-containing protein.	0.999
Kpol_1033p49	Kpol_162p1	A7TJ44	A7TTU2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RPOLA_N domain-containing protein.	0.997
Kpol_1033p49	Kpol_186p2	A7TJ44	A7TTM7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
Kpol_1033p49	Kpol_186p3	A7TJ44	A7TTM8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Uncharacterized protein.	0.999
Kpol_1036p23	Kpol_1033p49	A7TEH4	A7TJ44	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
Kpol_1036p23	Kpol_1037p21	A7TEH4	A7TJW3	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
Kpol_1036p23	Kpol_1050p110	A7TEH4	A7TF04	Uncharacterized protein.	Uncharacterized protein.	0.999
Kpol_1036p23	Kpol_1051p32	A7TEH4	A7TMZ5	Uncharacterized protein.	Uncharacterized protein.	0.999
Kpol_1036p23	Kpol_1059p24	A7TEH4	A7TN28	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Kpol_1036p23	Kpol_1060p55	A7TEH4	A7TK52	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
Kpol_1036p23	Kpol_162p1	A7TEH4	A7TTU2	Uncharacterized protein.	RPOLA_N domain-containing protein.	0.997
Kpol_1036p23	Kpol_186p2	A7TEH4	A7TTM7	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
Kpol_1036p23	Kpol_186p3	A7TEH4	A7TTM8	Uncharacterized protein.	Uncharacterized protein.	0.999
Kpol_1037p21	Kpol_1033p49	A7TJW3	A7TJ44	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
Kpol_1037p21	Kpol_1036p23	A7TJW3	A7TEH4	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999