(6 nodes) Mitochondrial protein processing network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1013p19	Peptidase_S24 domain-containing protein. (174 aa)
	Kpol_1043p4	Mitochondrial inner membrane protease subunit. (189 aa)
	Kpol_1024p23	Uncharacterized protein; Belongs to the peptidase M16 family. (454 aa)
	Kpol_1004p33	UBX domain-containing protein. (626 aa)
	Kpol_401p3	AAA domain-containing protein. (786 aa)
	Kpol_1032p95	Uncharacterized protein; Belongs to the peptidase M16 family. (469 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1013p19	Kpol_1032p95	A7TH67	A7TH46	Peptidase_S24 domain-containing protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.466
Kpol_1013p19	Kpol_1043p4	A7TH67	A7TIM2	Peptidase_S24 domain-containing protein.	Mitochondrial inner membrane protease subunit.	0.474
Kpol_1024p23	Kpol_1032p95	A7TLI3	A7TH46	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.998
Kpol_1024p23	Kpol_401p3	A7TLI3	A7TRA2	Uncharacterized protein; Belongs to the peptidase M16 family.	AAA domain-containing protein.	0.506
Kpol_1032p95	Kpol_1013p19	A7TH46	A7TH67	Uncharacterized protein; Belongs to the peptidase M16 family.	Peptidase_S24 domain-containing protein.	0.466
Kpol_1032p95	Kpol_1024p23	A7TH46	A7TLI3	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.998
Kpol_1032p95	Kpol_401p3	A7TH46	A7TRA2	Uncharacterized protein; Belongs to the peptidase M16 family.	AAA domain-containing protein.	0.672
Kpol_1043p4	Kpol_1013p19	A7TIM2	A7TH67	Mitochondrial inner membrane protease subunit.	Peptidase_S24 domain-containing protein.	0.474
Kpol_401p3	Kpol_1024p23	A7TRA2	A7TLI3	AAA domain-containing protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.506
Kpol_401p3	Kpol_1032p95	A7TRA2	A7TH46	AAA domain-containing protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.672