(11 nodes) Kinetochore assembly network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1055p6	Uncharacterized protein; Belongs to the SKP1 family. (182 aa)
	Kpol_1055p23	Uncharacterized protein. (614 aa)
	Kpol_1031p77	Uncharacterized protein. (456 aa)
	Kpol_530p37	Uncharacterized protein. (88 aa)
	Kpol_1065p11	Uncharacterized protein. (287 aa)
	Kpol_1019p28	Uncharacterized protein. (202 aa)
	Kpol_467p18	Uncharacterized protein. (449 aa)
	Kpol_181p3	Histone domain-containing protein. (236 aa)
	Kpol_1017p2	Uncharacterized protein. (923 aa)
	Kpol_303p3	Uncharacterized protein. (375 aa)
	Kpol_282p4	Uncharacterized protein; Belongs to the actin family. (501 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1017p2	Kpol_1055p6	A7TRC9	A7TG80	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.527
Kpol_1017p2	Kpol_467p18	A7TRC9	A7TQG2	Uncharacterized protein.	Uncharacterized protein.	0.658
Kpol_1019p28	Kpol_181p3	A7TPC0	A7TTP5	Uncharacterized protein.	Histone domain-containing protein.	0.956
Kpol_1031p77	Kpol_1065p11	A7TI07	A7TL33	Uncharacterized protein.	Uncharacterized protein.	0.406
Kpol_1031p77	Kpol_181p3	A7TI07	A7TTP5	Uncharacterized protein.	Histone domain-containing protein.	0.920
Kpol_1055p23	Kpol_1065p11	A7TG98	A7TL33	Uncharacterized protein.	Uncharacterized protein.	0.666
Kpol_1055p6	Kpol_1017p2	A7TG80	A7TRC9	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.527
Kpol_1055p6	Kpol_181p3	A7TG80	A7TTP5	Uncharacterized protein; Belongs to the SKP1 family.	Histone domain-containing protein.	0.560
Kpol_1055p6	Kpol_303p3	A7TG80	A7TT00	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.945
Kpol_1055p6	Kpol_467p18	A7TG80	A7TQG2	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.994
Kpol_1065p11	Kpol_1031p77	A7TL33	A7TI07	Uncharacterized protein.	Uncharacterized protein.	0.406
Kpol_1065p11	Kpol_1055p23	A7TL33	A7TG98	Uncharacterized protein.	Uncharacterized protein.	0.666
Kpol_1065p11	Kpol_181p3	A7TL33	A7TTP5	Uncharacterized protein.	Histone domain-containing protein.	0.479
Kpol_181p3	Kpol_1019p28	A7TTP5	A7TPC0	Histone domain-containing protein.	Uncharacterized protein.	0.956
Kpol_181p3	Kpol_1031p77	A7TTP5	A7TI07	Histone domain-containing protein.	Uncharacterized protein.	0.920
Kpol_181p3	Kpol_1055p6	A7TTP5	A7TG80	Histone domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.560
Kpol_181p3	Kpol_1065p11	A7TTP5	A7TL33	Histone domain-containing protein.	Uncharacterized protein.	0.479
Kpol_181p3	Kpol_282p4	A7TTP5	A7TST0	Histone domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.822
Kpol_181p3	Kpol_467p18	A7TTP5	A7TQG2	Histone domain-containing protein.	Uncharacterized protein.	0.613
Kpol_282p4	Kpol_181p3	A7TST0	A7TTP5	Uncharacterized protein; Belongs to the actin family.	Histone domain-containing protein.	0.822