(60 nodes) Nucleotide-binding alpha-beta plait domain superfamily network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1073p17	RRM_1 domain-containing protein. (540 aa)
	Kpol_478p5	Uncharacterized protein. (794 aa)
	Kpol_1040p23	RRM domain-containing protein. (467 aa)
	Kpol_499p24	RRM domain-containing protein. (119 aa)
	Kpol_1026p21	Uncharacterized protein. (437 aa)
	Kpol_1026p16	RRM domain-containing protein. (277 aa)
	Kpol_1053p12	Smg4_UPF3 domain-containing protein. (399 aa)
	Kpol_1030p41	RRM domain-containing protein. (603 aa)
	Kpol_472p2	Uncharacterized protein. (259 aa)
	Kpol_479p17	RRM domain-containing protein. (507 aa)
	Kpol_487p6	Uncharacterized protein. (376 aa)
	Kpol_1008p23	Uncharacterized protein. (660 aa)
	Kpol_1033p35	RRM domain-containing protein. (817 aa)
	Kpol_1043p34	Uncharacterized protein. (442 aa)
	Kpol_1043p7	RRM Nup35-type domain-containing protein. (524 aa)
	Kpol_1010p45	RRM domain-containing protein. (432 aa)
	Kpol_1010p19	Uncharacterized protein. (1066 aa)
	Kpol_1054p28	RRM domain-containing protein. (683 aa)
	Kpol_1031p63	Uncharacterized protein. (344 aa)
	Kpol_1039p50	RRM domain-containing protein. (296 aa)
	Kpol_1013p51	RRM domain-containing protein. (417 aa)
	Kpol_1032p49	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (580 aa)
	Kpol_1048p18	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. (1074 aa)
	TIF35	Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (274 aa)
	Kpol_1023p90	Uncharacterized protein. (415 aa)
	Kpol_2000p44	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (338 aa)
	Kpol_2000p37	Uncharacterized protein. (601 aa)
	Kpol_1002p79	Nuclear cap-binding protein subunit 2. (209 aa)
	Kpol_1018p189	FoP_duplication domain-containing protein. (121 aa)
	Kpol_1002p69	Uncharacterized protein. (590 aa)
	Kpol_150p1	RRM domain-containing protein. (138 aa)
	Kpol_175p2	Uncharacterized protein. (288 aa)
	Kpol_186p1	Uncharacterized protein. (243 aa)
	Kpol_193p1	Uncharacterized protein. (591 aa)
	Kpol_224p1	Uncharacterized protein. (217 aa)
	Kpol_259p1	RRM domain-containing protein. (332 aa)
	Kpol_331p3	Uncharacterized protein. (308 aa)
	Kpol_322p1	RRM domain-containing protein. (87 aa)
	Kpol_311p2	Uncharacterized protein. (225 aa)
	Kpol_1075p1a	Uncharacterized protein. (264 aa)
	Kpol_1076p11	Uncharacterized protein. (526 aa)
	Kpol_400p1	RRM domain-containing protein. (600 aa)
	Kpol_411p17	Uncharacterized protein. (636 aa)
	Kpol_1069p8	Uncharacterized protein. (449 aa)
	Kpol_1029p3	RRM domain-containing protein. (224 aa)
	Kpol_455p4	Uncharacterized protein. (190 aa)
	Kpol_1038p9	RRM domain-containing protein. (508 aa)
	RRT5	Regulator of rDNA transcription protein 5; May be involved in the modulation of rDNA transcription. (333 aa)
	Kpol_1066p35	Uncharacterized protein. (300 aa)
	YME2	Mitochondrial escape protein 2; Plays a role in maintaining the mitochondrial genome and in controlling the mtDNA escape. Involved in the regulation of mtDNA nucleotide structure and number. May have a dispensable role in early maturation of pre-rRNA (By similarity); Belongs to the YME2 family. (830 aa)
	Kpol_520p3	Uncharacterized protein. (1067 aa)
	Kpol_1020p29	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (142 aa)
	Kpol_1041p8	RRM domain-containing protein. (214 aa)
	Kpol_1018p122	Uncharacterized protein. (634 aa)
	Kpol_1018p135	Uncharacterized protein. (863 aa)
	Kpol_1041p4	Uncharacterized protein. (384 aa)
	Kpol_530p46	Uncharacterized protein. (587 aa)
	Kpol_530p32	Uncharacterized protein. (684 aa)
	PRT1	Eukaryotic translation initiation factor 3 subunit B; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (726 aa)
	Kpol_1062p7	Uncharacterized protein. (760 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1002p69	Kpol_1002p79	A7TEA0	A7TEB0	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.481
Kpol_1002p69	Kpol_1043p34	A7TEA0	A7TIQ2	Uncharacterized protein.	Uncharacterized protein.	0.467
Kpol_1002p69	Kpol_322p1	A7TEA0	A7TSX5	Uncharacterized protein.	RRM domain-containing protein.	0.534
Kpol_1002p79	Kpol_1002p69	A7TEB0	A7TEA0	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.481
Kpol_1002p79	Kpol_1008p23	A7TEB0	A7TPY7	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.757
Kpol_1002p79	Kpol_1013p51	A7TEB0	A7TH98	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.481
Kpol_1002p79	Kpol_1018p122	A7TEB0	A7TDW6	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.757
Kpol_1002p79	Kpol_1018p189	A7TEB0	A7TE29	Nuclear cap-binding protein subunit 2.	FoP_duplication domain-containing protein.	0.584
Kpol_1002p79	Kpol_1020p29	A7TEB0	A7TLE0	Nuclear cap-binding protein subunit 2.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.622
Kpol_1002p79	Kpol_1023p90	A7TEB0	A7TFW1	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.795
Kpol_1002p79	Kpol_1026p16	A7TEB0	A7TNI6	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.731
Kpol_1002p79	Kpol_1030p41	A7TEB0	A7TMV9	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.635
Kpol_1002p79	Kpol_1031p63	A7TEB0	A7THZ4	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.492
Kpol_1002p79	Kpol_1032p49	A7TEB0	A7TH03	Nuclear cap-binding protein subunit 2.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.760
Kpol_1002p79	Kpol_1033p35	A7TEB0	A7TJ31	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.481
Kpol_1002p79	Kpol_1038p9	A7TEB0	A7TR00	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.481
Kpol_1002p79	Kpol_1039p50	A7TEB0	A7THH5	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.985
Kpol_1002p79	Kpol_1040p23	A7TEB0	A7TPL8	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.481
Kpol_1002p79	Kpol_1041p8	A7TEB0	A7TL75	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.481
Kpol_1002p79	Kpol_1043p34	A7TEB0	A7TIQ2	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.481