(25 nodes) RNA Polymerase III Transcription network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1059p24	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	Kpol_1051p32	Uncharacterized protein. (70 aa)
	Kpol_1014p11	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (321 aa)
	Kpol_1018p139	RPOLD domain-containing protein. (335 aa)
	Kpol_1036p23	Uncharacterized protein. (215 aa)
	Kpol_1050p110	Uncharacterized protein. (153 aa)
	Kpol_1050p114	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (638 aa)
	Kpol_2000p60	Uncharacterized protein. (1033 aa)
	Kpol_1048p4	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (240 aa)
	Kpol_1032p26	ENDO3c domain-containing protein. (282 aa)
	Kpol_1032p36	Uncharacterized protein. (251 aa)
	Kpol_1032p86	Uncharacterized protein. (222 aa)
	Kpol_461p13	Uncharacterized protein. (431 aa)
	Kpol_479p15	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1139 aa)
	Kpol_489p4	Uncharacterized protein. (339 aa)
	Kpol_473p3	RPOLD domain-containing protein. (320 aa)
	Kpol_1016p9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1460 aa)
	Kpol_1031p22	Uncharacterized protein. (652 aa)
	Kpol_1010p65	TFIIB-type domain-containing protein. (577 aa)
	Kpol_1043p39	Uncharacterized protein. (645 aa)
	Kpol_1060p43	Uncharacterized protein. (156 aa)
	Kpol_1072p45	Uncharacterized protein. (70 aa)
	Kpol_1025p35	B-block_TFIIIC domain-containing protein. (1184 aa)
	Kpol_1065p14	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (110 aa)
	Kpol_1003p33	SANT domain-containing protein. (572 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1003p33	Kpol_1010p65	A7TLZ1	A7TIK9	SANT domain-containing protein.	TFIIB-type domain-containing protein.	0.999
Kpol_1003p33	Kpol_1014p11	A7TLZ1	A7TNE0	SANT domain-containing protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.980
Kpol_1003p33	Kpol_1016p9	A7TLZ1	A7TNS6	SANT domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.975
Kpol_1003p33	Kpol_1018p139	A7TLZ1	A7TDY1	SANT domain-containing protein.	RPOLD domain-containing protein.	0.815
Kpol_1003p33	Kpol_1025p35	A7TLZ1	A7TKW0	SANT domain-containing protein.	B-block_TFIIIC domain-containing protein.	0.842
Kpol_1003p33	Kpol_1031p22	A7TLZ1	A7THV6	SANT domain-containing protein.	Uncharacterized protein.	0.501
Kpol_1003p33	Kpol_1032p36	A7TLZ1	A7TGZ0	SANT domain-containing protein.	Uncharacterized protein.	0.999
Kpol_1003p33	Kpol_1032p86	A7TLZ1	A7TH37	SANT domain-containing protein.	Uncharacterized protein.	0.923
Kpol_1003p33	Kpol_1036p23	A7TLZ1	A7TEH4	SANT domain-containing protein.	Uncharacterized protein.	0.868
Kpol_1003p33	Kpol_1043p39	A7TLZ1	A7TIQ7	SANT domain-containing protein.	Uncharacterized protein.	0.916
Kpol_1003p33	Kpol_1048p4	A7TLZ1	A7TGG7	SANT domain-containing protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.900
Kpol_1003p33	Kpol_1050p110	A7TLZ1	A7TF04	SANT domain-containing protein.	Uncharacterized protein.	0.890
Kpol_1003p33	Kpol_1050p114	A7TLZ1	A7TF08	SANT domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.942
Kpol_1003p33	Kpol_1051p32	A7TLZ1	A7TMZ5	SANT domain-containing protein.	Uncharacterized protein.	0.874
Kpol_1003p33	Kpol_1059p24	A7TLZ1	A7TN28	SANT domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.895
Kpol_1003p33	Kpol_1060p43	A7TLZ1	A7TK41	SANT domain-containing protein.	Uncharacterized protein.	0.941
Kpol_1003p33	Kpol_1065p14	A7TLZ1	A7TL36	SANT domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.848
Kpol_1003p33	Kpol_1072p45	A7TLZ1	A7TKR3	SANT domain-containing protein.	Uncharacterized protein.	0.829
Kpol_1003p33	Kpol_2000p60	A7TLZ1	A7TF68	SANT domain-containing protein.	Uncharacterized protein.	0.952
Kpol_1003p33	Kpol_461p13	A7TLZ1	A7TR49	SANT domain-containing protein.	Uncharacterized protein.	0.939