(7 nodes) Rho (Ras homology) subfamily of Ras-like small GTPases network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1013p48	Uncharacterized protein. (221 aa)
	Kpol_1008p17	Uncharacterized protein. (209 aa)
	Kpol_529p16	Uncharacterized protein. (191 aa)
	Kpol_1013p49	Uncharacterized protein. (210 aa)
	Kpol_1041p7	Uncharacterized protein. (287 aa)
	Kpol_1039p20	Uncharacterized protein. (210 aa)
	Kpol_1029p18	Uncharacterized protein. (188 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1008p17	Kpol_1041p7	A7TPY1	A7TL74	Uncharacterized protein.	Uncharacterized protein.	0.514
Kpol_1008p17	Kpol_529p16	A7TPY1	A7TM69	Uncharacterized protein.	Uncharacterized protein.	0.513
Kpol_1013p48	Kpol_1013p49	A7TH95	A7TH96	Uncharacterized protein.	Uncharacterized protein.	0.901
Kpol_1013p48	Kpol_1041p7	A7TH95	A7TL74	Uncharacterized protein.	Uncharacterized protein.	0.520
Kpol_1013p48	Kpol_529p16	A7TH95	A7TM69	Uncharacterized protein.	Uncharacterized protein.	0.512
Kpol_1013p49	Kpol_1013p48	A7TH96	A7TH95	Uncharacterized protein.	Uncharacterized protein.	0.901
Kpol_1013p49	Kpol_1041p7	A7TH96	A7TL74	Uncharacterized protein.	Uncharacterized protein.	0.514
Kpol_1013p49	Kpol_529p16	A7TH96	A7TM69	Uncharacterized protein.	Uncharacterized protein.	0.513
Kpol_1029p18	Kpol_1041p7	A7TR76	A7TL74	Uncharacterized protein.	Uncharacterized protein.	0.525
Kpol_1029p18	Kpol_529p16	A7TR76	A7TM69	Uncharacterized protein.	Uncharacterized protein.	0.555
Kpol_1039p20	Kpol_1041p7	A7THE7	A7TL74	Uncharacterized protein.	Uncharacterized protein.	0.529
Kpol_1039p20	Kpol_529p16	A7THE7	A7TM69	Uncharacterized protein.	Uncharacterized protein.	0.672
Kpol_1041p7	Kpol_1008p17	A7TL74	A7TPY1	Uncharacterized protein.	Uncharacterized protein.	0.514
Kpol_1041p7	Kpol_1013p48	A7TL74	A7TH95	Uncharacterized protein.	Uncharacterized protein.	0.520
Kpol_1041p7	Kpol_1013p49	A7TL74	A7TH96	Uncharacterized protein.	Uncharacterized protein.	0.514
Kpol_1041p7	Kpol_1029p18	A7TL74	A7TR76	Uncharacterized protein.	Uncharacterized protein.	0.525
Kpol_1041p7	Kpol_1039p20	A7TL74	A7THE7	Uncharacterized protein.	Uncharacterized protein.	0.529
Kpol_529p16	Kpol_1008p17	A7TM69	A7TPY1	Uncharacterized protein.	Uncharacterized protein.	0.513
Kpol_529p16	Kpol_1013p48	A7TM69	A7TH95	Uncharacterized protein.	Uncharacterized protein.	0.512
Kpol_529p16	Kpol_1013p49	A7TM69	A7TH96	Uncharacterized protein.	Uncharacterized protein.	0.513