(4 nodes) A domain family that is part of the cupin metalloenzyme superfamily. network (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Kpol_1008p7	Uncharacterized protein. (799 aa)
	Kpol_367p4	JmjC domain-containing protein. (514 aa)
	Kpol_1070p18	JmjC domain-containing protein. (482 aa)
	Kpol_1032p52	Uncharacterized protein. (824 aa)

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1008p7	Kpol_1032p52	A7TPX2	A7TH06	Uncharacterized protein.	Uncharacterized protein.	0.816
Kpol_1008p7	Kpol_1070p18	A7TPX2	A7TNL8	Uncharacterized protein.	JmjC domain-containing protein.	0.664
Kpol_1008p7	Kpol_367p4	A7TPX2	A7TRQ5	Uncharacterized protein.	JmjC domain-containing protein.	0.457
Kpol_1032p52	Kpol_1008p7	A7TH06	A7TPX2	Uncharacterized protein.	Uncharacterized protein.	0.816
Kpol_1032p52	Kpol_1070p18	A7TH06	A7TNL8	Uncharacterized protein.	JmjC domain-containing protein.	0.685
Kpol_1032p52	Kpol_367p4	A7TH06	A7TRQ5	Uncharacterized protein.	JmjC domain-containing protein.	0.456
Kpol_1070p18	Kpol_1008p7	A7TNL8	A7TPX2	JmjC domain-containing protein.	Uncharacterized protein.	0.664
Kpol_1070p18	Kpol_1032p52	A7TNL8	A7TH06	JmjC domain-containing protein.	Uncharacterized protein.	0.685
Kpol_367p4	Kpol_1008p7	A7TRQ5	A7TPX2	JmjC domain-containing protein.	Uncharacterized protein.	0.457
Kpol_367p4	Kpol_1032p52	A7TRQ5	A7TH06	JmjC domain-containing protein.	Uncharacterized protein.	0.456