26 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ablim3	Actin binding LIM protein family, member 3. (566 aa)
	limch1	LIM and calponin homology domains 1b. (1211 aa)
	bag3	BCL2 associated athanogene 3. (545 aa)
	pdlim1	PDZ and LIM domain 1 (elfin). (320 aa)
	LOC109959625	Uncharacterized protein. (1045 aa)
	trip6	Uncharacterized protein. (564 aa)
	pdlim5	PDZ and LIM domain 5a. (580 aa)
	LOC109970799	PDZ and LIM domain 5b. (613 aa)
	daam2	Dishevelled associated activator of morphogenesis 2. (1084 aa)
	ENSMALP00000021232	Uncharacterized protein. (273 aa)
	ENSMALP00000021243	PDZ domain-containing protein. (108 aa)
	LOC109971487	Myosin, light chain 12, genome duplicate 1. (172 aa)
	LOC109965713	LIM domain containing preferred translocation partner in lipoma. (569 aa)
	pdlim4	PDZ and LIM domain 4. (306 aa)
	LOC109956198	LIM zinc-binding domain-containing protein. (737 aa)
	fblim1	Filamin binding LIM protein 1. (398 aa)
	LOC109959955	Actin binding LIM protein family member 3. (612 aa)
	LOC109955362	Myosin light chain 12B. (172 aa)
	LOC109956204	Myosin, light chain 9a, regulatory. (173 aa)
	LOC109966230	Zyxin. (526 aa)
	pdlim3	PDZ and LIM domain 3a. (315 aa)
	pdlim7	PDZ and LIM domain 7. (405 aa)
	LOC109951864	LIM domain and actin binding 1a. (704 aa)
	LOC109955507	Uncharacterized protein. (1297 aa)
	ENSMALP00000006197	Uncharacterized protein. (1138 aa)
	LOC109953843	Dishevelled associated activator of morphogenesis 1b. (968 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000021232	ENSMALP00000021243	ENSMALP00000021232	ENSMALP00000021243	Uncharacterized protein.	PDZ domain-containing protein.	0.835
ENSMALP00000021243	ENSMALP00000021232	ENSMALP00000021243	ENSMALP00000021232	PDZ domain-containing protein.	Uncharacterized protein.	0.835
LOC109955362	LOC109956204	ENSMALP00000029302	ENSMALP00000031995	Myosin light chain 12B.	Myosin, light chain 9a, regulatory.	0.905
LOC109955362	LOC109971487	ENSMALP00000029302	ENSMALP00000023645	Myosin light chain 12B.	Myosin, light chain 12, genome duplicate 1.	0.900
LOC109956204	LOC109955362	ENSMALP00000031995	ENSMALP00000029302	Myosin, light chain 9a, regulatory.	Myosin light chain 12B.	0.905
LOC109956204	LOC109971487	ENSMALP00000031995	ENSMALP00000023645	Myosin, light chain 9a, regulatory.	Myosin, light chain 12, genome duplicate 1.	0.905
LOC109959625	daam2	ENSMALP00000012602	ENSMALP00000017700	Uncharacterized protein.	Dishevelled associated activator of morphogenesis 2.	0.901
LOC109971487	LOC109955362	ENSMALP00000023645	ENSMALP00000029302	Myosin, light chain 12, genome duplicate 1.	Myosin light chain 12B.	0.900
LOC109971487	LOC109956204	ENSMALP00000023645	ENSMALP00000031995	Myosin, light chain 12, genome duplicate 1.	Myosin, light chain 9a, regulatory.	0.905
daam2	LOC109959625	ENSMALP00000017700	ENSMALP00000012602	Dishevelled associated activator of morphogenesis 2.	Uncharacterized protein.	0.901