STRINGSTRING
vcl vcl cxadr cxadr LOC109964741 LOC109964741 LOC109958552 LOC109958552 LOC109957990 LOC109957990 ctnnb1 ctnnb1 nrap nrap LOC109961051 LOC109961051 LOC109972214 LOC109972214 LOC109952192 LOC109952192 CDH2 CDH2 gja5 gja5 fermt2 fermt2 LOC109961177 LOC109961177 LOC109958750 LOC109958750 scn4b scn4b ENSMALP00000009384 ENSMALP00000009384 LOC109966573 LOC109966573
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vclVinculin b. (1066 aa)
cxadrCXADR Ig-like cell adhesion molecule. (373 aa)
LOC109964741Uncharacterized protein. (752 aa)
LOC109958552FXYD domain-containing ion transport regulator; Belongs to the FXYD family. (101 aa)
LOC109957990Junction plakoglobin a. (718 aa)
ctnnb1Catenin (cadherin-associated protein), beta 1. (783 aa)
nrapNebulin-related anchoring protein. (1627 aa)
LOC109961051Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (407 aa)
LOC109972214Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (844 aa)
LOC109952192Sodium channel, voltage-gated, type I, beta a. (223 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (907 aa)
gja5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (383 aa)
fermt2Fermitin family member 2. (680 aa)
LOC109961177Vinculin a. (1134 aa)
LOC109958750Sodium channel, voltage-gated, type I, beta b. (221 aa)
scn4bSodium channel, voltage-gated, type IV, beta a. (228 aa)
ENSMALP00000009384Uncharacterized protein. (1044 aa)
LOC109966573Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (354 aa)
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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