STRINGSTRING
stbd1 stbd1 LOC109951807 LOC109951807 wdr45 wdr45 WIPI1 WIPI1 ATG2B ATG2B wipi2 wipi2 atg5 atg5 atg14 atg14 atg12 atg12 atg2a atg2a LOC109965629 LOC109965629 wdr45b wdr45b atg9a atg9a LOC109954765 LOC109954765 ulk2 ulk2 atg16l1 atg16l1 rb1cc1 rb1cc1 LOC109957632 LOC109957632
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
stbd1CBM20 domain-containing protein. (864 aa)
LOC109951807ATG16 autophagy related 16-like 2 (S. cerevisiae). (310 aa)
wdr45WD repeat domain 45. (358 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (442 aa)
ATG2BAutophagy related 2B. (2076 aa)
wipi2WD repeat domain, phosphoinositide interacting 2. (515 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
atg14Autophagy related 14. (508 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (115 aa)
atg2aAutophagy related 2A. (1981 aa)
LOC109965629Unc-51 like autophagy activating kinase 1. (1035 aa)
wdr45bWD repeat domain 45B. (344 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (820 aa)
LOC109954765Unc-51 like autophagy activating kinase 1a. (746 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1045 aa)
atg16l1ATG16 autophagy related 16-like 1 (S. cerevisiae). (592 aa)
rb1cc1RB1-inducible coiled-coil 1. (1620 aa)
LOC109957632Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (808 aa)
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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