46 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Fndc1	Fibronectin type-III domain-containing protein. (110 aa)
	rbpj	Recombination signal binding protein for immunoglobulin kappa J region. (489 aa)
	pink1	PTEN induced kinase 1. (563 aa)
	LOC109958367	Recombination signal binding protein for immunoglobulin kappa J region a. (468 aa)
	fam167a	Family with sequence similarity 167 member Ab. (208 aa)
	LOC109972353	Zgc:73226. (181 aa)
	LOC109960754	TSC complex subunit 1b. (1172 aa)
	epas1	Uncharacterized protein. (323 aa)
	LOC109956779	Cytoplasmic polyadenylation element binding protein 4a. (714 aa)
	eef2k	Eukaryotic elongation factor 2 kinase. (741 aa)
	LOC109973530	Egl-9 family hypoxia-inducible factor 2. (570 aa)
	hif1an	Hypoxia inducible factor 1 subunit alpha inhibitor. (346 aa)
	egln1	Egl-9 family hypoxia-inducible factor 1a. (339 aa)
	LOC109961482	Family with sequence similarity 162 member A. (158 aa)
	LOC109973547	Hypoxia inducible factor 1 subunit alpha, like. (670 aa)
	egln3	Egl-9 family hypoxia-inducible factor 3. (235 aa)
	nkx3-1	NK3 homeobox 1. (195 aa)
	sirt1	Sirtuin 1. (691 aa)
	mtor	Serine/threonine-protein kinase TOR. (2354 aa)
	hif1a	Hypoxia inducible factor 1 subunit alpha a. (713 aa)
	LOC109966662	2-aminoethanethiol (cysteamine) dioxygenase a. (263 aa)
	nfe2l2	Nuclear factor, erythroid 2-like 2a. (608 aa)
	rgcc	Regulator of cell cycle. (121 aa)
	LOC109963808	Endothelial PAS domain protein 1b. (875 aa)
	pick1	Protein interacting with prkca 1. (288 aa)
	cpeb2	Cytoplasmic polyadenylation element binding protein 2. (725 aa)
	ndnf	Neuron-derived neurotrophic factor. (573 aa)
	LOC109970330	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1448 aa)
	hyou1	Hypoxia up-regulated 1. (984 aa)
	ENSMALP00000020677	2-aminoethanethiol (cysteamine) dioxygenase b. (233 aa)
	cpeb1	Cytoplasmic polyadenylation element binding protein 1b. (577 aa)
	vhl	Von Hippel-Lindau tumor suppressor. (167 aa)
	LOC109973830	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
	mpl	MPL proto-oncogene, thrombopoietin receptor. (643 aa)
	LOC109962223	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (169 aa)
	bnip3	BCL2 interacting protein 3. (191 aa)
	stox1	Storkhead box 1. (1113 aa)
	ak4	GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities. (227 aa)
	ppard	Peroxisome proliferator-activated receptor delta b. (496 aa)
	bad	BCL2 associated agonist of cell death b. (168 aa)
	LOC109957760	BCL2 apoptosis regulator b. (228 aa)
	ptgs2	Prostaglandin-endoperoxide synthase 2b. (604 aa)
	nop53	NOP53 ribosome biogenesis factor. (499 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (431 aa)
	aifm1	Apoptosis inducing factor mitochondrion associated 1. (652 aa)
	aqp1	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000020677	LOC109966662	ENSMALP00000020677	ENSMALP00000013746	2-aminoethanethiol (cysteamine) dioxygenase b.	2-aminoethanethiol (cysteamine) dioxygenase a.	0.903
LOC109957760	LOC109972353	ENSMALP00000027274	ENSMALP00000005524	BCL2 apoptosis regulator b.	Zgc:73226.	0.971
LOC109957760	bad	ENSMALP00000027274	ENSMALP00000027247	BCL2 apoptosis regulator b.	BCL2 associated agonist of cell death b.	0.992
LOC109957760	bnip3	ENSMALP00000027274	ENSMALP00000025348	BCL2 apoptosis regulator b.	BCL2 interacting protein 3.	0.971
LOC109957760	mtor	ENSMALP00000027274	ENSMALP00000010977	BCL2 apoptosis regulator b.	Serine/threonine-protein kinase TOR.	0.460
LOC109957760	pink1	ENSMALP00000027274	ENSMALP00000002665	BCL2 apoptosis regulator b.	PTEN induced kinase 1.	0.461
LOC109957760	sirt1	ENSMALP00000027274	ENSMALP00000010733	BCL2 apoptosis regulator b.	Sirtuin 1.	0.506
LOC109958367	rbpj	ENSMALP00000002870	ENSMALP00000002466	Recombination signal binding protein for immunoglobulin kappa J region a.	Recombination signal binding protein for immunoglobulin kappa J region.	0.900
LOC109960754	hyou1	ENSMALP00000005769	ENSMALP00000020646	TSC complex subunit 1b.	Hypoxia up-regulated 1.	0.686
LOC109960754	mtor	ENSMALP00000005769	ENSMALP00000010977	TSC complex subunit 1b.	Serine/threonine-protein kinase TOR.	0.938
LOC109960754	pink1	ENSMALP00000005769	ENSMALP00000002665	TSC complex subunit 1b.	PTEN induced kinase 1.	0.505
LOC109960754	sirt1	ENSMALP00000005769	ENSMALP00000010733	TSC complex subunit 1b.	Sirtuin 1.	0.480
LOC109961482	eef2k	ENSMALP00000008756	ENSMALP00000007159	Family with sequence similarity 162 member A.	Eukaryotic elongation factor 2 kinase.	0.552
LOC109963808	LOC109973530	ENSMALP00000016578	ENSMALP00000007276	Endothelial PAS domain protein 1b.	Egl-9 family hypoxia-inducible factor 2.	0.802
LOC109963808	egln1	ENSMALP00000016578	ENSMALP00000007898	Endothelial PAS domain protein 1b.	Egl-9 family hypoxia-inducible factor 1a.	0.802
LOC109963808	egln3	ENSMALP00000016578	ENSMALP00000009251	Endothelial PAS domain protein 1b.	Egl-9 family hypoxia-inducible factor 3.	0.802
LOC109963808	hif1an	ENSMALP00000016578	ENSMALP00000007892	Endothelial PAS domain protein 1b.	Hypoxia inducible factor 1 subunit alpha inhibitor.	0.836
LOC109963808	sirt1	ENSMALP00000016578	ENSMALP00000010733	Endothelial PAS domain protein 1b.	Sirtuin 1.	0.429
LOC109963808	vhl	ENSMALP00000016578	ENSMALP00000022766	Endothelial PAS domain protein 1b.	Von Hippel-Lindau tumor suppressor.	0.887
LOC109966662	ENSMALP00000020677	ENSMALP00000013746	ENSMALP00000020677	2-aminoethanethiol (cysteamine) dioxygenase a.	2-aminoethanethiol (cysteamine) dioxygenase b.	0.903