STRINGSTRING
LOC109962912 LOC109962912 synm synm LOC109956922 LOC109956922 smpx smpx LOC109961177 LOC109961177 HOMER1 HOMER1 SVIL SVIL vcl vcl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109962912Supervillin d. (1311 aa)
synmSynemin, intermediate filament protein; Belongs to the intermediate filament family. (1014 aa)
LOC109956922Homer scaffold protein 1b. (491 aa)
smpxSmall muscle protein X-linked. (89 aa)
LOC109961177Vinculin a. (1134 aa)
HOMER1Homer scaffold protein 1. (355 aa)
SVILSupervillin. (1651 aa)
vclVinculin b. (1066 aa)
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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