24 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dhx9	DEAH (Asp-Glu-Ala-His) box helicase 9. (1173 aa)
	LOC109963627	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1472 aa)
	LOC109969454	Galectin. (131 aa)
	Lgals1	Galectin. (134 aa)
	ENSMALP00000007065	Galectin. (77 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	LOC109958790	Zgc:63863. (414 aa)
	LOC109960250	Transmembrane serine protease 4a; Belongs to the peptidase S1 family. (416 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	atg12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (115 aa)
	ppie	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
	tbc1d20	TBC1 domain family, member 20. (406 aa)
	LOC109959327	Remodeling and spacing factor 1b, tandem duplicate 1. (1725 aa)
	rsf1	PHD-type domain-containing protein. (1458 aa)
	ddb1	Damage-specific DNA binding protein 1. (1139 aa)
	LOC109970361	Galectin. (127 aa)
	vps37b	VPS37B subunit of ESCRT-I. (283 aa)
	fkbp6	Peptidylprolyl isomerase. (322 aa)
	top2b	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1606 aa)
	ppid	Peptidylprolyl isomerase D. (370 aa)
	adar	Adenosine deaminase RNA specific. (1359 aa)
	TMEM250	Transmembrane protein 250. (139 aa)
	LOC109966202	Uncharacterized protein. (509 aa)
	pde12	Phosphodiesterase 12. (571 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109966202	atg5	ENSMALP00000032726	ENSMALP00000011768	Uncharacterized protein.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.582
LOC109966202	ddb1	ENSMALP00000032726	ENSMALP00000020186	Uncharacterized protein.	Damage-specific DNA binding protein 1.	0.486
LOC109966202	tsg101	ENSMALP00000032726	ENSMALP00000009171	Uncharacterized protein.	Tumor susceptibility 101a.	0.456
adar	dhx9	ENSMALP00000029900	ENSMALP00000000499	Adenosine deaminase RNA specific.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.645
atg12	atg5	ENSMALP00000014520	ENSMALP00000011768	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
atg5	LOC109966202	ENSMALP00000011768	ENSMALP00000032726	Autophagy protein 5; Involved in autophagic vesicle formation.	Uncharacterized protein.	0.582
atg5	atg12	ENSMALP00000011768	ENSMALP00000014520	Autophagy protein 5; Involved in autophagic vesicle formation.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.999
ddb1	LOC109966202	ENSMALP00000020186	ENSMALP00000032726	Damage-specific DNA binding protein 1.	Uncharacterized protein.	0.486
dhx9	adar	ENSMALP00000000499	ENSMALP00000029900	DEAH (Asp-Glu-Ala-His) box helicase 9.	Adenosine deaminase RNA specific.	0.645
dhx9	ppie	ENSMALP00000000499	ENSMALP00000015730	DEAH (Asp-Glu-Ala-His) box helicase 9.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.483
ppid	ppie	ENSMALP00000028894	ENSMALP00000015730	Peptidylprolyl isomerase D.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.437
ppie	dhx9	ENSMALP00000015730	ENSMALP00000000499	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.483
ppie	ppid	ENSMALP00000015730	ENSMALP00000028894	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	Peptidylprolyl isomerase D.	0.437
tsg101	LOC109966202	ENSMALP00000009171	ENSMALP00000032726	Tumor susceptibility 101a.	Uncharacterized protein.	0.456
tsg101	vps37b	ENSMALP00000009171	ENSMALP00000021405	Tumor susceptibility 101a.	VPS37B subunit of ESCRT-I.	0.998
vps37b	tsg101	ENSMALP00000021405	ENSMALP00000009171	VPS37B subunit of ESCRT-I.	Tumor susceptibility 101a.	0.998