STRINGSTRING
ppwd1 ppwd1 dhx34 dhx34 hnrnpr hnrnpr bcas2 bcas2 lsm3 lsm3 ENSMALP00000009004 ENSMALP00000009004 ppil3 ppil3 prpf4b prpf4b ess2 ess2 sf3a3 sf3a3 prpf8 prpf8 cdc40 cdc40 DDX41 DDX41 mtrex mtrex SNRPG SNRPG snrnp200 snrnp200 snw1 snw1 cwc22 cwc22 plrg1 plrg1 Dhx35 Dhx35 DHX35 DHX35 prpf6 prpf6 sf3a1 sf3a1 ddx23 ddx23 pnn pnn dhx38 dhx38 ppil1 ppil1 ppil2 ppil2 LOC109966897 LOC109966897 LOC109966948 LOC109966948 sf3a2 sf3a2 sf3b6 sf3b6 cwc15 cwc15 sart1 sart1 sf3b1 sf3b1 aqr aqr lsm2 lsm2 snrnp40 snrnp40 snrpa1 snrpa1 xab2 xab2 sf3b2 sf3b2 eftud2 eftud2 lsm7 lsm7 snrpd1 snrpd1 gpatch1 gpatch1 wdr83 wdr83 LOC109967465 LOC109967465 rbm22 rbm22 snrpe snrpe snrpd3 snrpd3 dhx8 dhx8 WDR25 WDR25 ENSMALP00000017965 ENSMALP00000017965 ENSMALP00000017951 ENSMALP00000017951 cunh19orf54 cunh19orf54 Snrpf Snrpf syncrip syncrip ENSMALP00000017379 ENSMALP00000017379 crnkl1 crnkl1 ppie ppie prpf19 prpf19 ENSMALP00000015404 ENSMALP00000015404 syf2 syf2 snrpd2 snrpd2 rbmx rbmx cwc27 cwc27
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (594 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1150 aa)
hnrnprHeterogeneous nuclear ribonucleoprotein R. (632 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
lsm3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
ENSMALP00000009004Sm domain-containing protein. (59 aa)
ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
prpf4bPre-mRNA processing factor 4Bb. (1079 aa)
ess2Ess-2 splicing factor homolog. (473 aa)
sf3a3Splicing factor 3a, subunit 3. (501 aa)
prpf8Pre-mRNA processing factor 8. (2244 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (595 aa)
DDX41DEAD-box helicase 41. (588 aa)
mtrexMtr4 exosome RNA helicase. (977 aa)
SNRPGSmall nuclear ribonucleoprotein G. (72 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2136 aa)
snw1SNW domain containing 1. (536 aa)
cwc22MI domain-containing protein. (936 aa)
plrg1Pleiotropic regulator 1. (510 aa)
Dhx35Uncharacterized protein. (152 aa)
DHX35DEAH-box helicase 35. (664 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (923 aa)
sf3a1Splicing factor 3a, subunit 1. (787 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (804 aa)
pnnPinin, desmosome associated protein. (650 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1294 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (573 aa)
LOC109966897Small nuclear ribonucleoprotein polypeptides B and B1. (296 aa)
LOC109966948ISY1 splicing factor homolog. (284 aa)
sf3a2Splicing factor 3a, subunit 2. (296 aa)
sf3b6Splicing factor 3b, subunit 6. (186 aa)
cwc15CWC15 spliceosome associated protein homolog. (232 aa)
sart1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (773 aa)
sf3b1Splicing factor 3b, subunit 1. (1314 aa)
aqrAquarius intron-binding spliceosomal factor. (1312 aa)
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (335 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (284 aa)
xab2XPA binding protein 2. (848 aa)
sf3b2Splicing factor 3b, subunit 2. (847 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (838 aa)
lsm7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (130 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
gpatch1G patch domain containing 1. (941 aa)
wdr83WD repeat domain containing 83. (317 aa)
LOC109967465Heterogeneous nuclear ribonucleoprotein M. (673 aa)
rbm22RNA binding motif protein 22. (427 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (71 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1197 aa)
WDR25WD repeat domain 25. (551 aa)
ENSMALP00000017965Uncharacterized protein. (81 aa)
ENSMALP00000017951Uncharacterized protein. (69 aa)
cunh19orf54Zgc:153119. (310 aa)
SnrpfSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
syncripSynaptotagmin binding, cytoplasmic RNA interacting protein, like. (576 aa)
ENSMALP00000017379Zinc finger, CCHC domain containing 8. (594 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (650 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
prpf19Pre-mRNA processing factor 19. (488 aa)
ENSMALP00000015404PWI domain-containing protein. (243 aa)
syf2SYF2 pre-mRNA-splicing factor. (241 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
rbmxRNA binding motif protein X-linked. (372 aa)
cwc27CWC27 spliceosome associated cyclophilin. (483 aa)
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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