62 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109973830	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
	s100z	Protein S100; Belongs to the S-100 family. (98 aa)
	LOC109969930	EGF-like domain-containing protein. (400 aa)
	psenen	Presenilin enhancer, gamma-secretase subunit. (101 aa)
	gipc1	GIPC PDZ domain containing family, member 1. (351 aa)
	LOC109973499	Protein kinase N1b. (959 aa)
	ARSB	Arylsulfatase B. (459 aa)
	ENSMALP00000005003	Apelin receptor early endogenous ligand. (54 aa)
	prkx	Protein kinase X-linked. (370 aa)
	LOC109971761	MADS-box domain-containing protein. (516 aa)
	LOC109951266	PH domain-containing protein. (1281 aa)
	LOC109967069	Sulfatase domain-containing protein. (721 aa)
	LOC109968357	Galectin. (324 aa)
	LOC109963696	Endothelin 2. (170 aa)
	ENSMALP00000008708	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (453 aa)
	cxcl13	SCY domain-containing protein. (126 aa)
	SRF	Serum response factor. (526 aa)
	LOC109954531	Uncharacterized protein. (346 aa)
	scarb1	Scavenger receptor class B, member 1; Belongs to the CD36 family. (511 aa)
	ENSMALP00000009498	Cytochrome P450, family 1, subfamily C, polypeptide 2. (522 aa)
	sema3d	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (793 aa)
	ENSMALP00000009558	Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (522 aa)
	ENSMALP00000010259	Si:cabz01100188.1. (354 aa)
	LOC109974160	Protein tyrosine phosphatase non-receptor type 9b. (750 aa)
	mmrn2	Multimerin 2a. (999 aa)
	apln	Apelin. (77 aa)
	PTP4A3	Protein tyrosine phosphatase 4A3. (162 aa)
	CCN3	Cellular communication network factor 3. (353 aa)
	LOC109962476	Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (563 aa)
	lmo2	LIM domain only 2 (rhombotin-like 1). (159 aa)
	ACTA1	Actin alpha 1, skeletal muscle. (377 aa)
	efnb2	Ephrin-B2a; Belongs to the ephrin family. (335 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (917 aa)
	LOC109973660	Ephrin-A5a; Belongs to the ephrin family. (230 aa)
	LOC109972509	Thrombospondin, type I, domain containing 7Aa. (1593 aa)
	LOC109951461	Anillin, actin binding protein. (1120 aa)
	LOC109974287	Arylsulfatase family, member Ia. (568 aa)
	LOC109969639	Actin alpha 2, smooth muscle. (377 aa)
	slc24a5	Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (423 aa)
	ENSMALP00000019544	Testis associated actin remodelling kinase 2. (326 aa)
	LOC109958344	GIPC PDZ domain containing family, member 3. (324 aa)
	LOC109951559	Leukotriene B4 receptor 2b. (372 aa)
	LOC109970893	Protein kinase N3. (916 aa)
	ptpn9	Protein tyrosine phosphatase non-receptor type 9a. (570 aa)
	gipc2	GIPC PDZ domain containing family, member 2. (329 aa)
	tesk1	Si:dkeyp-75h12.2. (683 aa)
	LOC109962223	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (169 aa)
	LOC109956594	Ephrin-A5b; Belongs to the ephrin family. (229 aa)
	LOC109961110	Lysyl oxidase-like 4. (750 aa)
	ppard	Peroxisome proliferator-activated receptor delta b. (496 aa)
	LOC109951515	Apolipoprotein A-Ib. (312 aa)
	Arsj	Arylsulfatase family, member J. (551 aa)
	ENSMALP00000028645	Si:dkey-174i8.1. (258 aa)
	LOC109966924	Si:dkey-49n23.1; Belongs to the semaphorin family. (754 aa)
	LOC109960589	Collagen and calcium binding EGF domains 1. (407 aa)
	LOC109952886	Leukotriene B4 receptor 2a. (368 aa)
	rab13	Uncharacterized protein. (200 aa)
	wdpcp	WD repeat containing planar cell polarity effector. (699 aa)
	LOC109962396	Uncharacterized protein. (377 aa)
	grem1	Gremlin 1a, DAN family BMP antagonist. (182 aa)
	cdh5	Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. (737 aa)
	LOC109966273	Protein kinase N1a. (932 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTA1	LOC109951266	ENSMALP00000013142	ENSMALP00000005958	Actin alpha 1, skeletal muscle.	PH domain-containing protein.	0.419
ACTA1	LOC109951461	ENSMALP00000013142	ENSMALP00000015155	Actin alpha 1, skeletal muscle.	Anillin, actin binding protein.	0.419
ACTA1	LOC109962396	ENSMALP00000013142	ENSMALP00000031364	Actin alpha 1, skeletal muscle.	Uncharacterized protein.	0.900
ENSMALP00000005003	apln	ENSMALP00000005003	ENSMALP00000012082	Apelin receptor early endogenous ligand.	Apelin.	0.693
LOC109951266	ACTA1	ENSMALP00000005958	ENSMALP00000013142	PH domain-containing protein.	Actin alpha 1, skeletal muscle.	0.419
LOC109951266	LOC109954531	ENSMALP00000005958	ENSMALP00000009063	PH domain-containing protein.	Uncharacterized protein.	0.419
LOC109951266	LOC109962396	ENSMALP00000005958	ENSMALP00000031364	PH domain-containing protein.	Uncharacterized protein.	0.419
LOC109951266	LOC109969639	ENSMALP00000005958	ENSMALP00000017036	PH domain-containing protein.	Actin alpha 2, smooth muscle.	0.419
LOC109951461	ACTA1	ENSMALP00000015155	ENSMALP00000013142	Anillin, actin binding protein.	Actin alpha 1, skeletal muscle.	0.419
LOC109951461	LOC109954531	ENSMALP00000015155	ENSMALP00000009063	Anillin, actin binding protein.	Uncharacterized protein.	0.419
LOC109951461	LOC109962396	ENSMALP00000015155	ENSMALP00000031364	Anillin, actin binding protein.	Uncharacterized protein.	0.419
LOC109951461	LOC109969639	ENSMALP00000015155	ENSMALP00000017036	Anillin, actin binding protein.	Actin alpha 2, smooth muscle.	0.419
LOC109951515	scarb1	ENSMALP00000028026	ENSMALP00000009146	Apolipoprotein A-Ib.	Scavenger receptor class B, member 1; Belongs to the CD36 family.	0.570
LOC109954531	LOC109951266	ENSMALP00000009063	ENSMALP00000005958	Uncharacterized protein.	PH domain-containing protein.	0.419
LOC109954531	LOC109951461	ENSMALP00000009063	ENSMALP00000015155	Uncharacterized protein.	Anillin, actin binding protein.	0.419
LOC109956594	efnb2	ENSMALP00000025284	ENSMALP00000013354	Ephrin-A5b; Belongs to the ephrin family.	Ephrin-B2a; Belongs to the ephrin family.	0.570
LOC109958344	nrp1	ENSMALP00000020046	ENSMALP00000013625	GIPC PDZ domain containing family, member 3.	Neuropilin; Belongs to the neuropilin family.	0.456
LOC109962396	ACTA1	ENSMALP00000031364	ENSMALP00000013142	Uncharacterized protein.	Actin alpha 1, skeletal muscle.	0.900
LOC109962396	LOC109951266	ENSMALP00000031364	ENSMALP00000005958	Uncharacterized protein.	PH domain-containing protein.	0.419
LOC109962396	LOC109951461	ENSMALP00000031364	ENSMALP00000015155	Uncharacterized protein.	Anillin, actin binding protein.	0.419