13 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fyco1	FYVE and coiled-coil domain containing 1a. (1290 aa)
	Fyco1	GOLD domain-containing protein. (149 aa)
	clec16a	C-type lectin domain containing 16A. (947 aa)
	tbc1d25	TBC1 domain family, member 25. (858 aa)
	calcoco2	SKICH domain-containing protein. (620 aa)
	tmem39a	Transmembrane protein 39A. (493 aa)
	atg12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (115 aa)
	phf23	PHD finger protein 23b. (320 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	LOC109969479	Tectonin beta-propeller repeat containing 1b. (1182 aa)
	tmem39b	Transmembrane protein 39B. (488 aa)
	cln3	Battenin. (438 aa)
	LOC109955370	FYVE and coiled-coil domain containing 1b. (1579 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fyco1	LOC109955370	ENSMALP00000027463	ENSMALP00000029766	GOLD domain-containing protein.	FYVE and coiled-coil domain containing 1b.	0.900
Fyco1	fyco1	ENSMALP00000027463	ENSMALP00000027512	GOLD domain-containing protein.	FYVE and coiled-coil domain containing 1a.	0.900
LOC109955370	Fyco1	ENSMALP00000029766	ENSMALP00000027463	FYVE and coiled-coil domain containing 1b.	GOLD domain-containing protein.	0.900
LOC109969479	atg12	ENSMALP00000009301	ENSMALP00000014520	Tectonin beta-propeller repeat containing 1b.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.800
LOC109969479	atg5	ENSMALP00000009301	ENSMALP00000011768	Tectonin beta-propeller repeat containing 1b.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.977
atg12	LOC109969479	ENSMALP00000014520	ENSMALP00000009301	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Tectonin beta-propeller repeat containing 1b.	0.800
atg12	atg5	ENSMALP00000014520	ENSMALP00000011768	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
atg5	LOC109969479	ENSMALP00000011768	ENSMALP00000009301	Autophagy protein 5; Involved in autophagic vesicle formation.	Tectonin beta-propeller repeat containing 1b.	0.977
atg5	atg12	ENSMALP00000011768	ENSMALP00000014520	Autophagy protein 5; Involved in autophagic vesicle formation.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.999
atg5	calcoco2	ENSMALP00000011768	ENSMALP00000020360	Autophagy protein 5; Involved in autophagic vesicle formation.	SKICH domain-containing protein.	0.411
calcoco2	atg5	ENSMALP00000020360	ENSMALP00000011768	SKICH domain-containing protein.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.411
clec16a	tmem39a	ENSMALP00000026720	ENSMALP00000019763	C-type lectin domain containing 16A.	Transmembrane protein 39A.	0.455
fyco1	Fyco1	ENSMALP00000027512	ENSMALP00000027463	FYVE and coiled-coil domain containing 1a.	GOLD domain-containing protein.	0.900
tmem39a	clec16a	ENSMALP00000019763	ENSMALP00000026720	Transmembrane protein 39A.	C-type lectin domain containing 16A.	0.455