21 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMALP00000018918	Uncharacterized protein. (484 aa)
	LOC109963535	Uncharacterized protein. (1396 aa)
	rictor	RPTOR independent companion of MTOR, complex 2 a. (1593 aa)
	LOC109974651	Fibronectin type-III domain-containing protein. (1064 aa)
	LOC109956686	Si:dkey-280e21.3. (604 aa)
	ripor2	RHO family interacting cell polarization regulator 2. (1140 aa)
	rufy3	RUN and FYVE domain containing 3. (666 aa)
	ENSMALP00000008746	Uncharacterized protein. (698 aa)
	krit1	KRIT1 ankyrin repeat containing. (711 aa)
	ENSMALP00000015088	Shootin 1. (413 aa)
	ankfn1	Ankyrin repeat and fibronectin type III domain containing 1. (1079 aa)
	bcas3	BCAS3 microtubule associated cell migration factor. (888 aa)
	rack1	Receptor for activated C kinase 1. (317 aa)
	ENSMALP00000022504	Uncharacterized protein. (695 aa)
	Plekhg3	Si:ch73-212j7.3. (172 aa)
	abl2	Tyrosine-protein kinase. (1215 aa)
	ENSMALP00000025507	Uncharacterized protein. (452 aa)
	ripor3	RIPOR family member 3. (913 aa)
	wdpcp	WD repeat containing planar cell polarity effector. (699 aa)
	cdh5	Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. (737 aa)
	LOC109960591	Tyrosine-protein kinase. (1102 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000008746	ENSMALP00000025507	ENSMALP00000008746	ENSMALP00000025507	Uncharacterized protein.	Uncharacterized protein.	0.707
ENSMALP00000008746	Plekhg3	ENSMALP00000008746	ENSMALP00000022531	Uncharacterized protein.	Si:ch73-212j7.3.	0.901
ENSMALP00000015088	rufy3	ENSMALP00000015088	ENSMALP00000008716	Shootin 1.	RUN and FYVE domain containing 3.	0.514
ENSMALP00000018918	ankfn1	ENSMALP00000018918	ENSMALP00000018984	Uncharacterized protein.	Ankyrin repeat and fibronectin type III domain containing 1.	0.890
ENSMALP00000022504	ENSMALP00000025507	ENSMALP00000022504	ENSMALP00000025507	Uncharacterized protein.	Uncharacterized protein.	0.868
ENSMALP00000022504	Plekhg3	ENSMALP00000022504	ENSMALP00000022531	Uncharacterized protein.	Si:ch73-212j7.3.	0.899
ENSMALP00000025507	ENSMALP00000008746	ENSMALP00000025507	ENSMALP00000008746	Uncharacterized protein.	Uncharacterized protein.	0.707
ENSMALP00000025507	ENSMALP00000022504	ENSMALP00000025507	ENSMALP00000022504	Uncharacterized protein.	Uncharacterized protein.	0.868
LOC109956686	rufy3	ENSMALP00000003585	ENSMALP00000008716	Si:dkey-280e21.3.	RUN and FYVE domain containing 3.	0.514
LOC109960591	abl2	ENSMALP00000032096	ENSMALP00000023022	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.915
Plekhg3	ENSMALP00000008746	ENSMALP00000022531	ENSMALP00000008746	Si:ch73-212j7.3.	Uncharacterized protein.	0.901
Plekhg3	ENSMALP00000022504	ENSMALP00000022531	ENSMALP00000022504	Si:ch73-212j7.3.	Uncharacterized protein.	0.899
abl2	LOC109960591	ENSMALP00000023022	ENSMALP00000032096	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.915
ankfn1	ENSMALP00000018918	ENSMALP00000018984	ENSMALP00000018918	Ankyrin repeat and fibronectin type III domain containing 1.	Uncharacterized protein.	0.890
cdh5	krit1	ENSMALP00000031560	ENSMALP00000011335	Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.	KRIT1 ankyrin repeat containing.	0.475
krit1	cdh5	ENSMALP00000011335	ENSMALP00000031560	KRIT1 ankyrin repeat containing.	Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.	0.475
rufy3	ENSMALP00000015088	ENSMALP00000008716	ENSMALP00000015088	RUN and FYVE domain containing 3.	Shootin 1.	0.514
rufy3	LOC109956686	ENSMALP00000008716	ENSMALP00000003585	RUN and FYVE domain containing 3.	Si:dkey-280e21.3.	0.514