26 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109970308	Rap guanine nucleotide exchange factor (GEF) 3. (764 aa)
	rapgef4	Rap guanine nucleotide exchange factor (GEF) 4. (871 aa)
	deptor	DEP domain containing MTOR-interacting protein. (435 aa)
	rgs7	Regulator of G protein signaling 7a. (459 aa)
	ENSMALP00000026866	Uncharacterized protein. (478 aa)
	ENSMALP00000025852	DEP domain-containing protein. (302 aa)
	RGS6	Regulator of G protein signaling 6. (485 aa)
	plek	Pleckstrin. (351 aa)
	LOC109967923	Regulator of G protein signaling 9b. (659 aa)
	LOC109969269	Dishevelled segment polarity protein 3a. (684 aa)
	dvl1	Dishevelled segment polarity protein 1a. (547 aa)
	LOC109962356	Regulator of G protein signaling 6. (533 aa)
	LOC109969253	Zgc:171558. (869 aa)
	LOC109952236	DEP domain containing 1a. (863 aa)
	LOC109961084	G protein-coupled receptor 155b. (917 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (2041 aa)
	depdc5	DEP domain containing 5. (1474 aa)
	gpr155	G protein-coupled receptor 155a. (827 aa)
	depdc7	DEP domain containing 7, paralog a. (530 aa)
	prex2	Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2. (1565 aa)
	LOC109958544	Rho-GAP domain-containing protein. (522 aa)
	LOC109964701	Regulator of G protein signaling 9a. (485 aa)
	LOC109962540	DEP domain-containing protein. (594 aa)
	ENSMALP00000008430	DEP domain-containing protein. (129 aa)
	prex1	Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1. (1585 aa)
	depdc4	Si:ch211-265o23.1. (550 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109962356	LOC109964701	ENSMALP00000031857	ENSMALP00000005491	Regulator of G protein signaling 6.	Regulator of G protein signaling 9a.	0.501
LOC109962356	LOC109967923	ENSMALP00000031857	ENSMALP00000021601	Regulator of G protein signaling 6.	Regulator of G protein signaling 9b.	0.501
LOC109964701	LOC109962356	ENSMALP00000005491	ENSMALP00000031857	Regulator of G protein signaling 9a.	Regulator of G protein signaling 6.	0.501
LOC109964701	LOC109967923	ENSMALP00000005491	ENSMALP00000021601	Regulator of G protein signaling 9a.	Regulator of G protein signaling 9b.	0.901
LOC109964701	RGS6	ENSMALP00000005491	ENSMALP00000022857	Regulator of G protein signaling 9a.	Regulator of G protein signaling 6.	0.518
LOC109964701	rgs7	ENSMALP00000005491	ENSMALP00000027758	Regulator of G protein signaling 9a.	Regulator of G protein signaling 7a.	0.504
LOC109967923	LOC109962356	ENSMALP00000021601	ENSMALP00000031857	Regulator of G protein signaling 9b.	Regulator of G protein signaling 6.	0.501
LOC109967923	LOC109964701	ENSMALP00000021601	ENSMALP00000005491	Regulator of G protein signaling 9b.	Regulator of G protein signaling 9a.	0.901
LOC109967923	RGS6	ENSMALP00000021601	ENSMALP00000022857	Regulator of G protein signaling 9b.	Regulator of G protein signaling 6.	0.501
LOC109967923	rgs7	ENSMALP00000021601	ENSMALP00000027758	Regulator of G protein signaling 9b.	Regulator of G protein signaling 7a.	0.504
LOC109969253	LOC109970308	ENSMALP00000031787	ENSMALP00000017466	Zgc:171558.	Rap guanine nucleotide exchange factor (GEF) 3.	0.542
LOC109969269	dvl1	ENSMALP00000032060	ENSMALP00000020018	Dishevelled segment polarity protein 3a.	Dishevelled segment polarity protein 1a.	0.911
LOC109970308	LOC109969253	ENSMALP00000017466	ENSMALP00000031787	Rap guanine nucleotide exchange factor (GEF) 3.	Zgc:171558.	0.542
LOC109970308	rapgef4	ENSMALP00000017466	ENSMALP00000012737	Rap guanine nucleotide exchange factor (GEF) 3.	Rap guanine nucleotide exchange factor (GEF) 4.	0.540
RGS6	LOC109964701	ENSMALP00000022857	ENSMALP00000005491	Regulator of G protein signaling 6.	Regulator of G protein signaling 9a.	0.518
RGS6	LOC109967923	ENSMALP00000022857	ENSMALP00000021601	Regulator of G protein signaling 6.	Regulator of G protein signaling 9b.	0.501
dvl1	LOC109969269	ENSMALP00000020018	ENSMALP00000032060	Dishevelled segment polarity protein 1a.	Dishevelled segment polarity protein 3a.	0.911
rapgef4	LOC109970308	ENSMALP00000012737	ENSMALP00000017466	Rap guanine nucleotide exchange factor (GEF) 4.	Rap guanine nucleotide exchange factor (GEF) 3.	0.540
rgs7	LOC109964701	ENSMALP00000027758	ENSMALP00000005491	Regulator of G protein signaling 7a.	Regulator of G protein signaling 9a.	0.504
rgs7	LOC109967923	ENSMALP00000027758	ENSMALP00000021601	Regulator of G protein signaling 7a.	Regulator of G protein signaling 9b.	0.504