10 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109966206	Guanine nucleotide binding protein (G protein), beta polypeptide 3a. (340 aa)
	nle1	Notchless homolog 1 (Drosophila). (509 aa)
	LOC109959438	Guanine nucleotide binding protein (G protein), beta polypeptide 2. (340 aa)
	chaf1b	Chromatin assembly factor 1, subunit B. (614 aa)
	GNB4	G protein subunit beta 4. (294 aa)
	GNB5	Guanine nucleotide binding protein (G protein), beta 5b. (337 aa)
	gnb1	Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (340 aa)
	gnb5	Guanine nucleotide binding protein (G protein), beta 5a. (361 aa)
	LOC109968899	Guanine nucleotide binding protein (G protein), beta polypeptide 3b. (342 aa)
	LOC109959036	Guanine nucleotide binding protein (G protein), beta polypeptide 1b. (327 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNB4	GNB5	ENSMALP00000025217	ENSMALP00000016773	G protein subunit beta 4.	Guanine nucleotide binding protein (G protein), beta 5b.	0.419
GNB4	gnb5	ENSMALP00000025217	ENSMALP00000009815	G protein subunit beta 4.	Guanine nucleotide binding protein (G protein), beta 5a.	0.416
GNB5	GNB4	ENSMALP00000016773	ENSMALP00000025217	Guanine nucleotide binding protein (G protein), beta 5b.	G protein subunit beta 4.	0.419
GNB5	LOC109959036	ENSMALP00000016773	ENSMALP00000002400	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.429
GNB5	LOC109959438	ENSMALP00000016773	ENSMALP00000026327	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.423
GNB5	gnb1	ENSMALP00000016773	ENSMALP00000012412	Guanine nucleotide binding protein (G protein), beta 5b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.430
LOC109959036	GNB5	ENSMALP00000002400	ENSMALP00000016773	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Guanine nucleotide binding protein (G protein), beta 5b.	0.429
LOC109959036	gnb5	ENSMALP00000002400	ENSMALP00000009815	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Guanine nucleotide binding protein (G protein), beta 5a.	0.425
LOC109959438	GNB5	ENSMALP00000026327	ENSMALP00000016773	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide binding protein (G protein), beta 5b.	0.423
LOC109959438	gnb5	ENSMALP00000026327	ENSMALP00000009815	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide binding protein (G protein), beta 5a.	0.418
gnb1	GNB5	ENSMALP00000012412	ENSMALP00000016773	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide binding protein (G protein), beta 5b.	0.430
gnb1	gnb5	ENSMALP00000012412	ENSMALP00000009815	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	Guanine nucleotide binding protein (G protein), beta 5a.	0.425
gnb5	GNB4	ENSMALP00000009815	ENSMALP00000025217	Guanine nucleotide binding protein (G protein), beta 5a.	G protein subunit beta 4.	0.416
gnb5	LOC109959036	ENSMALP00000009815	ENSMALP00000002400	Guanine nucleotide binding protein (G protein), beta 5a.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.425
gnb5	LOC109959438	ENSMALP00000009815	ENSMALP00000026327	Guanine nucleotide binding protein (G protein), beta 5a.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.418
gnb5	gnb1	ENSMALP00000009815	ENSMALP00000012412	Guanine nucleotide binding protein (G protein), beta 5a.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.425