27 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMALP00000020004	GPS2_interact domain-containing protein. (273 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	ENSMALP00000022575	MH1 domain-containing protein. (101 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	skil	SKI-like proto-oncogene a. (776 aa)
	ncor2	Nuclear receptor corepressor 2. (2205 aa)
	ski	V-ski avian sarcoma viral oncogene homolog a. (727 aa)
	LOC109974571	Mothers against decapentaplegic homolog. (566 aa)
	LOC109958888	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (393 aa)
	LOC109960668	E3 ubiquitin-protein ligase. (870 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	ENSMALP00000031991	Homeobox_KN domain-containing protein. (103 aa)
	snw1	SNW domain containing 1. (536 aa)
	LOC109965371	Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2451 aa)
	LOC109959661	Mothers against decapentaplegic homolog. (424 aa)
	LOC109959019	V-ski avian sarcoma viral oncogene homolog b. (672 aa)
	parp1	Poly [ADP-ribose] polymerase. (1018 aa)
	LOC109974756	Uncharacterized protein. (245 aa)
	smad2	Mothers against decapentaplegic homolog. (470 aa)
	smad3	Mothers against decapentaplegic homolog. (425 aa)
	trim33	Tripartite motif containing 33. (1189 aa)
	atp1b4	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (342 aa)
	LOC109961442	TGFB-induced factor homeobox 1. (301 aa)
	LOC109961575	Mothers against decapentaplegic homolog. (510 aa)
	SMAD4	Mothers against decapentaplegic homolog. (503 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	Ncor1	Uncharacterized protein. (422 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000020004	ENSMALP00000022575	ENSMALP00000020004	ENSMALP00000022575	GPS2_interact domain-containing protein.	MH1 domain-containing protein.	0.458
ENSMALP00000020004	LOC109959019	ENSMALP00000020004	ENSMALP00000004497	GPS2_interact domain-containing protein.	V-ski avian sarcoma viral oncogene homolog b.	0.618
ENSMALP00000020004	LOC109959661	ENSMALP00000020004	ENSMALP00000003306	GPS2_interact domain-containing protein.	Mothers against decapentaplegic homolog.	0.415
ENSMALP00000020004	LOC109961575	ENSMALP00000020004	ENSMALP00000013623	GPS2_interact domain-containing protein.	Mothers against decapentaplegic homolog.	0.458
ENSMALP00000020004	LOC109974571	ENSMALP00000020004	ENSMALP00000027982	GPS2_interact domain-containing protein.	Mothers against decapentaplegic homolog.	0.458
ENSMALP00000020004	LOC109974756	ENSMALP00000020004	ENSMALP00000008832	GPS2_interact domain-containing protein.	Uncharacterized protein.	0.528
ENSMALP00000020004	Ncor1	ENSMALP00000020004	ENSMALP00000020025	GPS2_interact domain-containing protein.	Uncharacterized protein.	0.937
ENSMALP00000020004	SMAD3	ENSMALP00000020004	ENSMALP00000018673	GPS2_interact domain-containing protein.	Mothers against decapentaplegic homolog.	0.415
ENSMALP00000020004	SMAD4	ENSMALP00000020004	ENSMALP00000017441	GPS2_interact domain-containing protein.	Mothers against decapentaplegic homolog.	0.458
ENSMALP00000020004	rps27a	ENSMALP00000020004	ENSMALP00000021113	GPS2_interact domain-containing protein.	Ribosomal protein S27a.	0.535
ENSMALP00000020004	ski	ENSMALP00000020004	ENSMALP00000027410	GPS2_interact domain-containing protein.	V-ski avian sarcoma viral oncogene homolog a.	0.697
ENSMALP00000020004	skil	ENSMALP00000020004	ENSMALP00000027103	GPS2_interact domain-containing protein.	SKI-like proto-oncogene a.	0.666
ENSMALP00000020004	smad2	ENSMALP00000020004	ENSMALP00000009412	GPS2_interact domain-containing protein.	Mothers against decapentaplegic homolog.	0.415
ENSMALP00000020004	smad3	ENSMALP00000020004	ENSMALP00000010530	GPS2_interact domain-containing protein.	Mothers against decapentaplegic homolog.	0.415
ENSMALP00000020004	snw1	ENSMALP00000020004	ENSMALP00000002670	GPS2_interact domain-containing protein.	SNW domain containing 1.	0.724
ENSMALP00000020004	uba52	ENSMALP00000020004	ENSMALP00000025854	GPS2_interact domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.589
ENSMALP00000022575	ENSMALP00000020004	ENSMALP00000022575	ENSMALP00000020004	MH1 domain-containing protein.	GPS2_interact domain-containing protein.	0.458
ENSMALP00000022575	ENSMALP00000031991	ENSMALP00000022575	ENSMALP00000031991	MH1 domain-containing protein.	Homeobox_KN domain-containing protein.	0.435
ENSMALP00000022575	LOC109959019	ENSMALP00000022575	ENSMALP00000004497	MH1 domain-containing protein.	V-ski avian sarcoma viral oncogene homolog b.	0.780
ENSMALP00000022575	LOC109959661	ENSMALP00000022575	ENSMALP00000003306	MH1 domain-containing protein.	Mothers against decapentaplegic homolog.	0.784