70 items (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109969361	Eph receptor A4b. (990 aa)
	epha8	Uncharacterized protein. (943 aa)
	psenen	Presenilin enhancer, gamma-secretase subunit. (101 aa)
	LOC109957378	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (838 aa)
	LOC109959053	Eph receptor A2 a. (963 aa)
	cltc	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1682 aa)
	LOC109952996	APH1B gamma secretase subunit. (258 aa)
	ephb2	Eph receptor B2b. (1034 aa)
	ap2a1	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (983 aa)
	vav3	Uncharacterized protein. (864 aa)
	cltb	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (206 aa)
	LOC109964176	Si:dkey-246i14.3; Belongs to the ephrin family. (200 aa)
	epha3	Eph receptor A3. (994 aa)
	ENSMALP00000005617	Protein kinase domain-containing protein. (162 aa)
	EPHA6	EPH receptor A6. (986 aa)
	LOC109957372	Uncharacterized protein. (378 aa)
	LOC109952430	Eph receptor B4b. (918 aa)
	ap2s1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
	vav2	Vav 2 guanine nucleotide exchange factor. (901 aa)
	LOC109974078	Eph receptor B3a. (926 aa)
	LOC109960764	Uncharacterized protein. (1010 aa)
	LOC109971823	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (442 aa)
	actb	Uncharacterized protein. (385 aa)
	clta	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (220 aa)
	epha2	Eph receptor A2 b. (995 aa)
	LOC109959315	AP complex subunit beta. (939 aa)
	efnb1	Ephrin-B1; Belongs to the ephrin family. (331 aa)
	efnb2	Ephrin-B2a; Belongs to the ephrin family. (335 aa)
	LOC109973660	Ephrin-A5a; Belongs to the ephrin family. (230 aa)
	LOC109969626	Ephrin-A2a; Belongs to the ephrin family. (204 aa)
	LOC109960315	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	LOC109970207	Receptor protein-tyrosine kinase. (1004 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1188 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1168 aa)
	LOC109971927	Ephrin-B3a; Belongs to the ephrin family. (341 aa)
	epha10	Uncharacterized protein. (973 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	epha7	Eph receptor A7. (992 aa)
	mmp2	Matrix metallopeptidase 2. (655 aa)
	LOC109959263	T cell lymphoma invasion and metastasis 1a. (1640 aa)
	NCSTN	Nicastrin. (701 aa)
	LOC109957665	EPH receptor B1. (1007 aa)
	ephb4	Eph receptor B4a. (936 aa)
	LOC109969270	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (442 aa)
	ephb3	Uncharacterized protein. (932 aa)
	LOC109963157	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (305 aa)
	LOC109961775	Uncharacterized protein. (1023 aa)
	LOC109965239	Eph receptor A6. (1157 aa)
	LOC109962428	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (429 aa)
	LOC109967522	T cell lymphoma invasion and metastasis 1b. (1591 aa)
	LOC109955480	Vav 3 guanine nucleotide exchange factor b. (855 aa)
	LOC109968046	Tyrosine-protein kinase. (542 aa)
	LOC109956594	Ephrin-A5b; Belongs to the ephrin family. (229 aa)
	LOC109973284	Beta-actin. (375 aa)
	VAV1	Vav guanine nucleotide exchange factor 1. (804 aa)
	LOC109973926	Ephrin-A1a; Belongs to the ephrin family. (226 aa)
	LOC109973910	Ephrin-A3a; Belongs to the ephrin family. (223 aa)
	LOC109970991	Tyrosine-protein kinase. (543 aa)
	FYN	Tyrosine-protein kinase. (537 aa)
	mmp9	Matrix metallopeptidase 9. (676 aa)
	YES1	Tyrosine-protein kinase. (566 aa)
	LOC109955443	Tyrosine-protein kinase. (460 aa)
	ENSMALP00000029461	Ephrin-A3b; Belongs to the ephrin family. (190 aa)
	LOC109964162	Ephrin-A1b; Belongs to the ephrin family. (234 aa)
	ENSMALP00000029749	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (271 aa)
	epha4	Eph receptor A4, like. (978 aa)
	LOC109957217	Si:ch73-40a2.1. (900 aa)
	LOC109956512	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1570 aa)
	dnm1	Dynamin 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (847 aa)
	LOC109969331	Uncharacterized protein. (1088 aa)

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000005617	FYN	ENSMALP00000005617	ENSMALP00000027762	Protein kinase domain-containing protein.	Tyrosine-protein kinase.	0.452
ENSMALP00000005617	LOC109955480	ENSMALP00000005617	ENSMALP00000024858	Protein kinase domain-containing protein.	Vav 3 guanine nucleotide exchange factor b.	0.415
ENSMALP00000005617	LOC109968046	ENSMALP00000005617	ENSMALP00000024943	Protein kinase domain-containing protein.	Tyrosine-protein kinase.	0.452
ENSMALP00000005617	VAV1	ENSMALP00000005617	ENSMALP00000026982	Protein kinase domain-containing protein.	Vav guanine nucleotide exchange factor 1.	0.415
ENSMALP00000005617	vav2	ENSMALP00000005617	ENSMALP00000007507	Protein kinase domain-containing protein.	Vav 2 guanine nucleotide exchange factor.	0.415
ENSMALP00000005617	vav3	ENSMALP00000005617	ENSMALP00000004457	Protein kinase domain-containing protein.	Uncharacterized protein.	0.415
ENSMALP00000029461	EPHA6	ENSMALP00000029461	ENSMALP00000005693	Ephrin-A3b; Belongs to the ephrin family.	EPH receptor A6.	0.530
ENSMALP00000029461	LOC109952430	ENSMALP00000029461	ENSMALP00000006656	Ephrin-A3b; Belongs to the ephrin family.	Eph receptor B4b.	0.533
ENSMALP00000029461	LOC109956594	ENSMALP00000029461	ENSMALP00000025284	Ephrin-A3b; Belongs to the ephrin family.	Ephrin-A5b; Belongs to the ephrin family.	0.534
ENSMALP00000029461	LOC109957217	ENSMALP00000029461	ENSMALP00000030550	Ephrin-A3b; Belongs to the ephrin family.	Si:ch73-40a2.1.	0.548
ENSMALP00000029461	LOC109957665	ENSMALP00000029461	ENSMALP00000021077	Ephrin-A3b; Belongs to the ephrin family.	EPH receptor B1.	0.533
ENSMALP00000029461	LOC109959053	ENSMALP00000029461	ENSMALP00000002105	Ephrin-A3b; Belongs to the ephrin family.	Eph receptor A2 a.	0.706
ENSMALP00000029461	LOC109960764	ENSMALP00000029461	ENSMALP00000009547	Ephrin-A3b; Belongs to the ephrin family.	Uncharacterized protein.	0.530
ENSMALP00000029461	LOC109961775	ENSMALP00000029461	ENSMALP00000023722	Ephrin-A3b; Belongs to the ephrin family.	Uncharacterized protein.	0.533
ENSMALP00000029461	LOC109963157	ENSMALP00000029461	ENSMALP00000023405	Ephrin-A3b; Belongs to the ephrin family.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.526
ENSMALP00000029461	LOC109964162	ENSMALP00000029461	ENSMALP00000029617	Ephrin-A3b; Belongs to the ephrin family.	Ephrin-A1b; Belongs to the ephrin family.	0.408
ENSMALP00000029461	LOC109965239	ENSMALP00000029461	ENSMALP00000023749	Ephrin-A3b; Belongs to the ephrin family.	Eph receptor A6.	0.530
ENSMALP00000029461	LOC109969331	ENSMALP00000029461	ENSMALP00000031555	Ephrin-A3b; Belongs to the ephrin family.	Uncharacterized protein.	0.548
ENSMALP00000029461	LOC109969361	ENSMALP00000029461	ENSMALP00000031632	Ephrin-A3b; Belongs to the ephrin family.	Eph receptor A4b.	0.525
ENSMALP00000029461	LOC109970207	ENSMALP00000029461	ENSMALP00000015171	Ephrin-A3b; Belongs to the ephrin family.	Receptor protein-tyrosine kinase.	0.435