STRINGSTRING
mterf3 mterf3 mfn2 mfn2 pink1 pink1 LOC109974756 LOC109974756 map1lc3b map1lc3b LOC109959358 LOC109959358 tomm20 tomm20 atg5 atg5 tomm22 tomm22 prkn prkn ENSMALP00000014153 ENSMALP00000014153 atg12 atg12 tomm5 tomm5 ENSMALP00000019366 ENSMALP00000019366 tomm40 tomm40 LOC109958804 LOC109958804 rps27a rps27a tomm70 tomm70 vdac1 vdac1 mfn1 mfn1 TOMM7 TOMM7 sqstm1 sqstm1 map1lc3a map1lc3a tomm6 tomm6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mterf3Mitochondrial transcription termination factor 3. (421 aa)
mfn2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (758 aa)
pink1PTEN induced kinase 1. (563 aa)
LOC109974756Uncharacterized protein. (245 aa)
map1lc3bMicrotubule-associated protein 1 light chain 3 beta. (126 aa)
LOC109959358Uncharacterized protein. (331 aa)
tomm20Translocase of outer mitochondrial membrane 20b. (146 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
tomm22Translocase of outer mitochondrial membrane 22 homolog (yeast). (133 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (481 aa)
ENSMALP00000014153Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (314 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (115 aa)
tomm5Translocase of outer mitochondrial membrane 5 homolog (yeast). (51 aa)
ENSMALP00000019366zf-RING_14 domain-containing protein. (107 aa)
tomm40Translocase of outer mitochondrial membrane 40 homolog (yeast). (342 aa)
LOC109958804Translocase of outer mitochondrial membrane 40 homolog, like. (341 aa)
rps27aRibosomal protein S27a. (156 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (577 aa)
vdac1Voltage-dependent anion channel 1. (291 aa)
mfn1Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (758 aa)
TOMM7Translocase of outer mitochondrial membrane 7. (55 aa)
sqstm1Sequestosome 1. (402 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (121 aa)
tomm6Translocase of outer mitochondrial membrane 6 homolog (yeast). (77 aa)
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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