STRINGSTRING
KRG20073.1 KRG20073.1 KRG19216.1 KRG19216.1 yycG yycG ypdA ypdA kinE_2 kinE_2 hprK hprK zraS_1 zraS_1 zraS_2 zraS_2 cheA cheA pleD_4 pleD_4 KRG17588.1 KRG17588.1 kinE_1 kinE_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRG20073.1Transposase zinc-ribbon domain protein. (322 aa)
KRG19216.1Blue-light-activated protein. (651 aa)
yycGSensor histidine kinase YycG. (539 aa)
ypdASensor histidine kinase YpdA. (360 aa)
kinE_2Sporulation kinase E. (340 aa)
hprKHPr kinase/phosphorylase. (286 aa)
zraS_1Sensor protein ZraS. (704 aa)
zraS_2Sensor protein ZraS. (602 aa)
cheAChemotaxis protein CheA. (604 aa)
pleD_4Response regulator PleD. (510 aa)
KRG17588.1Blue-light-activated protein. (1001 aa)
kinE_1Sporulation kinase E. (357 aa)
Your Current Organism:
Berkiella cookevillensis
NCBI taxonomy Id: 437022
Other names: C. Berkiella cookevillensis, Candidatus Berkiella cookevillensis, Coxiellaceae bacterium CC99, Legionella-like amoebal pathogen CC99
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