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KRG19216.1 KRG19216.1 kinE_1 kinE_1 barA barA parE parE mutL mutL rpfC rpfC yycG yycG ypdA ypdA gyrB gyrB kinE_2 kinE_2 btrW btrW zraS_1 zraS_1 zraS_2 zraS_2 KRG17703.1 KRG17703.1 KRG17588.1 KRG17588.1 cheA cheA htpG htpG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KRG19216.1Blue-light-activated protein. (651 aa)
kinE_1Sporulation kinase E. (357 aa)
barASignal transduction histidine-protein kinase BarA. (944 aa)
parEDNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (631 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (579 aa)
rpfCSensory/regulatory protein RpfC. (1218 aa)
yycGSensor histidine kinase YycG. (539 aa)
ypdASensor histidine kinase YpdA. (360 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (805 aa)
kinE_2Sporulation kinase E. (340 aa)
btrWSerine/threonine-protein kinase BtrW. (139 aa)
zraS_1Sensor protein ZraS. (704 aa)
zraS_2Sensor protein ZraS. (602 aa)
KRG17703.1Hypothetical protein. (181 aa)
KRG17588.1Blue-light-activated protein. (1001 aa)
cheAChemotaxis protein CheA. (604 aa)
htpGChaperone protein HtpG; Molecular chaperone. Has ATPase activity. (641 aa)
Your Current Organism:
Berkiella cookevillensis
NCBI taxonomy Id: 437022
Other names: C. Berkiella cookevillensis, Candidatus Berkiella cookevillensis, Coxiellaceae bacterium CC99, Legionella-like amoebal pathogen CC99
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