STRINGSTRING
AZC_0220 AZC_0220 wcbD wcbD AZC_0494 AZC_0494 AZC_0035 AZC_0035 ndvA ndvA AZC_1621 AZC_1621 AZC_1638 AZC_1638 AZC_2820 AZC_2820 AZC_4422 AZC_4422 AZC_4629 AZC_4629 wcbD-2 wcbD-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AZC_0220Conserved hypothetical protein; Tetratricopeptide-like helical. (603 aa)
wcbDWcbD protein. (401 aa)
AZC_0494ABC transporter; ATP-binding/permease protein. (601 aa)
AZC_0035Putative periplasmic protein; Involved in polysaccharide export. (412 aa)
ndvAPutative beta-1,2-glucan ABC export system ATP-binding protein; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (594 aa)
AZC_1621ABC transporter nucleotide binding ATPase protein. (587 aa)
AZC_1638Unknown protein. (592 aa)
AZC_2820ABC transporter; Transmembrane region. (613 aa)
AZC_4422Putative periplasmic protein; Involved in polysaccharide export. (332 aa)
AZC_4629Periplasmic protein; Involved in polysaccharide export. (807 aa)
wcbD-2WcbD protein. (416 aa)
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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