STRINGSTRING
SKB28921.1 SKB28921.1 SKB28944.1 SKB28944.1 SKB28949.1 SKB28949.1 SKB28973.1 SKB28973.1 SKB40517.1 SKB40517.1 SKB68788.1 SKB68788.1 SKB68802.1 SKB68802.1 SKB68811.1 SKB68811.1 SKB91508.1 SKB91508.1 SKB91516.1 SKB91516.1 SKB91525.1 SKB91525.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SKB28921.1LVIVD repeat-containing protein. (1363 aa)
SKB28944.1Hypothetical protein. (636 aa)
SKB28949.1Haem-degrading. (670 aa)
SKB28973.1Cytochrome c554 and c-prime. (470 aa)
SKB40517.1Hypothetical protein. (180 aa)
SKB68788.1CHAT domain-containing protein. (1034 aa)
SKB68802.1Filamentous hemagglutinin family N-terminal domain-containing protein. (1531 aa)
SKB68811.1Hemolysin activation/secretion protein. (601 aa)
SKB91508.1Hypothetical protein. (292 aa)
SKB91516.1Fe-S-cluster-containing hydrogenase component 2. (817 aa)
SKB91525.1Cytochrome c-type biogenesis protein CcmH. (325 aa)
Your Current Organism:
Sphingomonas histidinilytica
NCBI taxonomy Id: 439228
Other names: CCM 7545, MTCC 9473, S. histidinilytica, Sphingomonas histidinilytica Nigam et al. 2010, Sphingomonas sp. UM2, strain UM2
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